DPOGS206522 | ||
---|---|---|
Transcript | DPOGS206522-TA | 657 bp |
Protein | DPOGS206522-PA | 218 aa |
Genomic position | DPSCF301427 - 330-1970 | |
RNAseq coverage | 173x (Rank: top 50%) |
Annotation | ||||
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Heliconius | HMEL008709 | 4e-104 | 83.33% |   |
Bombyx | BGIBMGA007078-TA | 1e-84 | 68.87% |   |
Drosophila | CG10959-PA | 8e-21 | 40.15% |   |
EBI UniRef50 | UniRef50_UPI0002233980 | 3e-20 | 41.22% | UPI0002233980 related cluster n=1 Tax=unknown RepID=UPI0002233980 |
NCBI RefSeq | XP_001847680.1 | 1e-20 | 39.10% | gastrula zinc finger protein XLCGF9.1 [Culex quinquefasciatus] |
NCBI nr blastp | gi|345785654 | 3e-20 | 41.67% | PREDICTED: zinc finger protein 229 [Canis lupus familiaris] |
NCBI nr blastx | gi|338716352 | 8e-24 | 38.93% | PREDICTED: zinc finger protein 717-like [Equus caballus] |
Group | ||||
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Gene Ontology | GO:0003676 | 4e-09 | nucleic acid binding | |
KEGG pathway |   | |||
InterPro domain | [66-91] IPR013087 | 4e-09 | Zinc finger, C2H2-type/integrase, DNA-binding | |
Orthology group | MCL25313 |   | Lepidoptera specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS206522-TA
ATGCGGCACAACCACGAACAGGGTTTGCTGCACAAATGTACGACCTGCGGCAAGGAGTTCCCCATTGTAGCCAGGCTCAAGAACCACATGTTGGTACATACAAACACTTTCAACTTTTTCTGCGACCTGTGCCCATATAAGTCGAAGCACAAATATTACCTGGTGATGCACATGAGGACCCACACAGGTGAGAAGCCGTACAAATGTGCCCAGTGTCCAGCGACCTTTGTGAATCCATCCAACCTTAATAAACACAAACTTACACACCAGGAGAAGCAGTTCAAATGTATGCTCTGTGAGAAAGCTTTTCGAACCGGCACAGCTTTATGGGAACATCACGACGCCAAACATATGAACATAAAACACACATGCACATACTGCGGACGAGACTTCTGTTACAAATCCGATCTACGTAAACACGAAATCAGGAACCATAATCGCGTGAAACGAGATTACATAGGAGGTGAGCCGACGTACAAACAAGTGGAGAGGTTGCAGAAGATACAAGAAGATGAGATGGAGAAGTGGAGACAGCAGCAGATCTCTGAGCCCAACTTCATGAGTGTACCAGACCCTAAAGATTTCGTACAGCACAATATGTACGTCTCAGACGTAGGGCCCATCATACAACCTCTTGGTGAGTTTACATTTGATTAA
>DPOGS206522-PA
MRHNHEQGLLHKCTTCGKEFPIVARLKNHMLVHTNTFNFFCDLCPYKSKHKYYLVMHMRTHTGEKPYKCAQCPATFVNPSNLNKHKLTHQEKQFKCMLCEKAFRTGTALWEHHDAKHMNIKHTCTYCGRDFCYKSDLRKHEIRNHNRVKRDYIGGEPTYKQVERLQKIQEDEMEKWRQQQISEPNFMSVPDPKDFVQHNMYVSDVGPIIQPLGEFTFD-