Monarch geneset OGS2.0

DPOGS206596
TranscriptDPOGS206596-TA7920 bp
ProteinDPOGS206596-PA2639 aa
Genomic positionDPSCF300048 - 1662409-1694061
RNAseq coverage961x (Rank: top 13%)
Annotation
HeliconiusHMEL0024440.077.65% 
BombyxBGIBMGA011982-TA3e-9734.93% 
DrosophilaMegalin-PA1e-10132.62% 
EBI UniRef50UniRef50_E2C9490.050.53%Sortilin-related receptor n=10 Tax=Eumetazoa RepID=E2C949_HARSA
NCBI RefSeqXP_392519.10.051.52%PREDICTED: similar to sortilin-related receptor containing LDLR class A repeats preproprotein [Apis mellifera]
NCBI nr blastpgi|3800122690.051.47%PREDICTED: sortilin-related receptor-like [Apis florea]
NCBI nr blastxgi|3287879270.051.52%PREDICTED: sortilin-related receptor [Apis mellifera]
Group
Gene OntologyGO:00160216.4e-103integral to membrane
GO:00055152.8e-17protein binding
KEGG pathwaydre:5657977e-119 
 K04550 (LRP1, CD91)maps-> Malaria
    Alzheimer's disease
InterPro domain[114-942] IPR0065816.4e-103VPS10
[944-1215] IPR0110421.6e-76Six-bladed beta-propeller, TolB-like
[1343-1380] IPR0021722.8e-17Low-density lipoprotein (LDL) receptor class A repeat
[2065-2166] IPR0089576.1e-17Fibronectin type III domain
[2068-2159] IPR0137833.8e-13Immunoglobulin-like fold
[1055-1100] IPR0000334.4e-12LDLR class B repeat
[805-1279] IPR0090307.2e-09Growth factor, receptor
[2071-2154] IPR0039615.3e-08Fibronectin, type III
Orthology groupMCL14933 Patchy
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS206596-TA
ATGTTAGCGGCTTTAGGATTTAAAATTAGTTACATTACATTGTTATTTATAATATCGTGCGCTTTGAGTGTTGAACAATATGCTCCACCGAGTAGTTCGCTGTACGTGGCAGAGGACCCGCATATTACGAAAAAAGTGACTGTAATAAATAGACAACTCGGAGAAAATGGAAAGGAAACATCTGAAAGGAAAAAACGTGAAGCTACAACAGTCCCACCACAGACAGTGGATAGAAATATCAGTACATGGACTTCACATCTCAACGACAGCCACCAACAGTTAATGGTGCACTGGGTGGGAGAAGGTTCAAATGTTATTATCTGCCTGGCTAGGGATTCTACATCCAGGGTCAAAGATCTTTCACCATCGGCTTTATATATATCCTATGACTATGGAAAGAACTTCACAAATAAGACGGAAAGTTTTCATTTGAGCGACAGTCCCGATAGCGGTTACGCACAGTTGGATAAGTTCTTCAATCATCCGAAATATCCTGAATTTTGCGTGTTCGTGGATTCGACTAATAAGAAGCTGTACTACACTCAAGACAACGGCAGGACTATAATAAGGTCTGATCTCAACTTCCATCCAAGCGAATTGGCTTTCGATGAGGACATACCCAATAGATATGTCATATTGGACAAGGTTGATTCCACTAGAAATCTATACATGACTTTCGATGGCGGCAAGAACTTCAAATTGATACAGAATTACGTTAAAACGTTCTTCTGGTCTTCGGGAGTCGGTTATCCTAAAGCTTTTTACGTGGAGCGATGGAAGCCGGGCGGCAACAGCACAGTGCTGACGGCCAACGATCCCTCGAACATGGTCAACGCCCAGGAACTGTTCGCTGATGCAAAGGACTTCCAGATCAAAGGAGACTTTATGTTCGCCACGAAACAGTCCAAAGAGAAGAACTCCTTGGATCTGTACATTTCACATCAGAGGGGTCCGTTCTTCAAAGCCAACTTCCAGACCGAATTGGATTTGCATAAGTTCCATATAGCCGACGTGACAGACAAACGTATATTTGTCTCTGTCATGCACACAGAGAATCTGGCAAATTTGTACGTTTCAGAGATAAATAGAAATTTCACACAGTACAATTTCGTGTTGAGCCTGGAACAGGTCCTGTGCTACTTCCCTGATGGTAACTGGAAGGACAGTTGGCTAGAGGATGTCACAGAGGATCCATTCACTGACTTGTATCGTGTGGAAGGTCTAAAGGGTATCTACATTGTGTCTAAGGTCAATTTCAAGTCGTTGTCCTTCAACATAGAACCAGAACATTTGATATCATTGATAACATTCGATCATGGTGTCACCTGGTCTCCGATTGTACCACCGTCCGAAGATGAGAATGGACCTGCCAGAAACGCAAATTGTATATGGCCGGACGGTAGTTTTAAATTAACTACCAATTACGTATATAGATTTCATGATACTCCTAAGAAGAACTCCTTGGATCTGTACATTTCACATCAGAGGGGTCCGTTCTTCAAAGCCAACTTCCAGACCGAATTGGATTTGCATAAGTTCCATATAGCCGACGTGACAGACAAACGTATATTTGTCTCTGTCATGCACACAGAGAATCTGGCAAATTTGTACGTTTCAGAGATAAATAGAAATTTCACACAGTACAATTTCGTGTTGAGCCTGGAACAGGTCCTGTGCTACTTCCCTGATGGTAACTGGAAGGACAGTTGGCTAGAGGATGTCACAGAGGATCCATTCACTGACTTGTATCGTGTGGAAGGTCTAAAGGGTATCTACATTGTGTCTAAGGTCAATTTCAAGTCGTTGTCCTTCAACATAGAACCAGAACATTTGATATCATTGATCACATTCGATCATGGTGTCACCTGGTCTCCGATTGTACCACCGTCCGAAGATGAGAATGGTAAACCGATGAATTGTTACAAAGAAAACTCATGCTCCCTACATTTGTGTCAGAAATTCAGCCAGCTGTATCCAGTTACGAGCATACCCGGATATGTGGTAGACACTGAATGGAGATCGGCGAGTATAATGAGTTCGAAATCAGCTCCAGGTATAATAATGGCTACGGGCGTGATCGGTAAATCACTGAAAGGTATCCCCGGAGTCTATATCAGTAGGGACGCGGGGCTTACATGGAAGAGGATCTTGAAAGATTATTATTTCTTCAACTACGGGGACCACGGTGGCGTTTTGGTTGCCGTCAAATACTTCAAATCTAGAGGAGAAACTAGAAGAATATTGTATTCGACCAACGAAGGAATCGATTGGCAATCTCATCAGTTCAATGCTGATGACCTTCGTATTTACGGACTTATGACTGAGCCTGGTGAGAACACAACGACTTTCACTATGTTCGGCTCAGCGAACGAACAGCATCAGTGGATCATAATAACAATGGATTTGATAAACACTTTTGCACGCAACTGTACTGAGAGCGATTATAAATTCTGGTCGCCGTCACCACCTACGTCCCCAAATTCTTCGGTTTCTTGCGTTCTTGGCACAAGGGATACATTCCAGCGTAGACTTGCGCACACGAATTGCCATAACGGTATAGACTACGACAGGCCCGTCAGGAAGGAGGTCTGCGAATGCAGCAGACGGGACTATGAATGTGATTTTGGATTCATTTTATCTCATAACACGTGTGTTCGCAATCAAAGTTTGGTGGGCAACGATCCTTATGCCGAGGCATCGGATTGTCAGCCCGGACATTACTTCCAAAGAACTAAAGGATACAGAAAGATAGACGGCGATGTTTGTACTGTCTCGTATTACATGCCTTACGAGCCGGAAATGGTCCCTTGTCCTTTGTCGGTGCCGACCGAATTCCTATGGGTTGCTTTGAGAGATAAAATAGCTCGCATCGATTTGTCAAACAACACGACTGTCATTCCTATCAAAAACCAACAGAACATTGTCGCTATTGAGTTTGATATGAAGAACAACTGCATCTACTGGGCTGATATCGAGGTAGATAAAATCAGTCGCCAGTGTTTCGACAACGGTAACGTACAGGAGATAGTGGTCGATACCGATTTAGCTAGCATAGAGGGTATGGCCTTGGATTGGATTTCTAATGTGCTTTTCTTTGTTGACGGCATGCGGAAGAAAATAGAAGCTGTGAGAACAGATCTTCAGAGCAGCGGCCGAATGAGGGCCACTATATTAGATTCTAAAGTTCTGTCCAAACCCCGTGGTATTGCTGTTCATCCGAGAGCTGGTTATCTGTACTGGACGGACTGGGATCGGAAGAATCCATCAGTTTCTAGATCGAATCTCGACGGTTCCAACGTTACCAAGTTATTTACAAAGCCAATAGTCCAATGGCCGAATGGCATAACCATCGATCAAATGTCGGATAGAATTTATTGGGTAGATGCTCTGGAGGATTACATAGCGAGTGCGGATCTCAATGGACAGTATTTCAGACGGATTCTATGGAATGACGAGAAAGTGTCTCATCCATTCGCAGTAGCCGTGTTAAAACATAAGATGTATTGGGACGATTGGAAAGCGAAGTCTATATTCACCGCGGACAAAGACACGGGAGCTGATATAGTCACTATCAACGACAAGCTATCCGGCTTGATGGATCTAAAGGTGTTCGCGTATTTCATGCAACACGGAAGTAACGCCTGTTCATACAAGAATACGAGTTGCGATACTTTGTGCCTCGGCGGTCCGAGGAATACTTTCAGCTGTCTTTGCCCAGACGGTTTTAAGAAAATAAACGGTAAATGCATGTGTCCAAACGGTTTGGAGCCAACTCCGAATATGACGTGCCCCAAACAGGCCGGATCTTGTTCACCGGAGGAGTTTTCTTGCAAGAACGGTAGATGCATTCGTAGCACGTGGCGTTGTGATGGCAACGACGATTGTGGGGATGGATCCGACGAGGTTGGGTGTGGGTGCGCTCCGCCCAGGATCGCCTGTGACGGCCGGTGCTACTTACCCCATTGGCGCTGTGACGGTGACATGGATTGCGCTGATAACAGTGACGAGAAAGATTGCGGTAAACAAAACTGTACGGAGAACCAGTTCCAGTGTGCCAACGGGAATTGCATCGAGAAAAGATGGGTTTGCGACGGAGATAACGACTGCAAAGATGGCTCTGATGAACGGAATTGTACGCAAAGTCTACCAAAACGTCCGGTAACGGTCAACTGTTCCGGTCACGTGTTCGCTTGCTCTAATGACACAAACGCTCTTTGTATACCGAACTCATGGGTTTGTGATGGAGAGAGAGACTGTCTCGGTGGTGAGGATGAGACAGAGGAGAGATGTACCAACTCCACCTGCGCCCCCTATATGTTCAGATGTCCTAGCGGAAAGTGCATTTATATGTCATGGGTTTGTGACGGCGAGAACGATTGCAGCGACGTAGATTCATCAGACGAGAAGAACTGTACCTCTATCGGCCACTCTAAGCTGATACCTCGACCTACGGAAAAACCAGATTTCGGTACCAAAGGTTCCTGCTTAGAATGGATGTTCAAGTGCGACAACGGCGTCTGTCTGCCGTATTGGTGGAGATGCGACGGCACCAACGACTGCGGCGATAACTCGGACGAGGCGGCGTGTGGCCTGCGACCCGACAACAAGACACACATAACGCCGGAGCGGGAGGTCAAACAGAAGTGCGCCAAGAACCAGTTTACCTGTGAACCCGGTGTGTGTATACCACTGACGTGGGTTTGTGACTCCGTTAGTGATTGTATCGACGGATCCGACGAGTCGGGCTGCGATCGGAGACACGACAAAGGAGATACCGGTCTGCGGTGCGAGCCCGCGGCGACGCCGTGCGCTGACGGCTCGGCCTGCATTGCCGACCACCAGCTGTGTGACGGAGTCATCGACTGTGGGGATCATAGTGACGAAATGCACTGCGGCACCGTAAATTGCGGTAAACAAAACTGTACGGAGAACCAGTTCCAGTGTGCCAACGGGAATTGCATCGAGAAAAGATGGGTTTGCGACGGAGATAACGACTGCAAAGATGGCTCTGATGAACGGAATTGTACGCAAAGTCTACCAAAACGTCCGGTAACGGTCAACTGTTCCGGTCACGTGTTCGCTTGCTCTAATGACACAAACGCTCTTTGTATACCGAACTCATGGGTTTGTGATGGAGAGAGAGACTGTCTCGGTGGTGAGGATGAGACAGAGGAGAGATGTACCAACTCCACCTGCGCCCCCTATATGTTCAGATGTCCTAGCGGAAAGTGCATTTATATGTCATGGGTTTGTGACGGCGAGAACGATTGCAGCGACGTAGATTCATCAGACGAGAAGAACTGTACCTCTATCGGCCACTCTAAGCTGATACCTCGACCTACGGAAAAACCAGATTTCGGTACCAAAGGTTCCTGCTTAGAATGGATGTTCAAGTGCGACAACGGCGTCTGTCTGCCGTATTGGTGGAGATGCGACGGCACCAACGACTGCGGCGATAACTCGGACGAGGCGGCGTGTGGCCTGCGACCCGACAACAAGACACACATAACGCCGGAGCGGGAGGTCAAACAGAAGTGCGCCAAGAACCAGTTTACCTGTGAACCCGGTGTGTGTATACCACTGACGTGGGTTTGTGACTCCGTTAGTGATTGTATCGACGGATCCGACGAGTCGGGCTGCGATCGGAGACACGACAAAGGAGATACCGGTCTGCGGTGCGAGCCCGCGGCCACGCCGTGCGCTGACGGCTCGGCCTGCATTGGCGACCACCAGCTGTGTGATGGAGTCATCGACTGTGGGGATCACAGTGACGAAATGCACTGCGGCACCCAGAAGCCAAAATCTCCTGTGAGTTGTCCTCCACGATACTTCGAGTGTGACGAGGGGACTCGCTGTCTGTGGCAAGCGATGGTGTGTAACTGGCATCAGGATTGCTACGACGGCAGCGACGAGGCCAATTGTACCAGCAATAATAATAATAATAACGTCTATCAGTATCTAAGCATCGGCGTAGACCAGTCGTCGATAAACTCAACCAGCTTCCTGATATCGTGTTGGATGGCGCAGCAGAGGACTGTGATGTATAACTTCCTGCCGTCCATCTCCAAGGTCGACGATGGAGTGTGGAAGAACATGACATGGACCAATGACAGCGTCTACAGGTATATTATGGCCAATGAAAGGCTCCGATTGGTCTGGTACTCGCAGCTGATTGTAATAATAAAGTCGATTCTGTTCATTTCAGTACCTTCGCCCCCTCAACGTCTAACCGTGCGTCAAATGATAGGAAGACGAGTCCAAATATTATGGGACCCACCCAAAGACCCGCGAGGCGTTATAACTCATTACACCATATACTACGTACCACCCTTACCGCCCATGGAGAAGACGGTACTCGCCGGCAGCGCCAACAAAACCGTGTCAGTGTTTTTGGACGGTTATTTCAAGCCAAATAAGAATTATTCCTTCTGGGTTACAGCATCAAACAACGCGAATACGTCCGAGTCTACTCCCATATCCTACCTTCTGTTTGATGATGTGGGTGATGTTGATGATATCGTTAACGCGAGCATGTCCCGTCTCGCTCCCACCAGTGTTAGCGTCACATGGAACAGATTGAGAGGGATAGAGGGCTACCTGGTAGACGTGAGACTACCTTCGCAGTACGCCAAACGACCGGTCATTAGAACAAAGGAGAATTCTGTCAATATCACAAACCTACCCACCGGTGTTAAAGTGTACATCGACATTAAAGCCTACAAAGACAATGTGATGGGCAATCCGTTCACGATACCATTCGTCACTGAGGGTGTTGAAGATGAAACATTGAATGTGACAGCAGTTCTGCTGAAAGAGAAGCGTACCTCAGTGGAACTGAGCTGGTCTCCTCCCGTTAGTGATAGATACAAGAATAAGAAGCTTGAATATGAAGTACATTATAACAATGTAATGCAATGGAGGATGTATCCGGGGGAGATGGTTAATGATACAAAGATAGTGACTGAGAGCAACAGGCTGGTTATAGATGGTCTTCATGCGTGTGAGAGTTACTTGTTCACTGTGGGACTCGTCGGAGGACCGCTGGCGGCTTTCAGGGAGATCATTACTAGAGAAAACGTCAGGGCTCCAGTTAAAGATTTGAATTATGTTTTTGATGACAAGAAGAACACTTTAAATATAACTTGGAAGGCTAACTGTGACGTTATCAAAGACCCGATCGCGTACAGGTTGGACGTTGAAGAATTAACTCACAACAAGTTTAGTCACTTCGTACTAAACGCTACCACTAATGTCTCGTTGATACATACTTTTGAGGACGTTCCCGTAGGAGGACGGTTTAATATATGCGTTTCTGCGTCTGTACGCGATTCATCAGTGAAATGTATTGAAGCTCGTAGCGGTGTCGTGGACTCACCTAACGCGGTTGTGGCCTGGCTCGCGCCTAACGGACACATCATGGTCAGCTGGAAACATGACGAACATAACTACACCCATAAACACAAGTACCAGATCCTTGTATCGGAGAAGGAGTTGGACGAGGATGTGCTTCACCCGGGAGATGACGTAACGGTCGTTGATGCGGAGTTCACGCCCATGTTGCTGAGCTCACACGCTCCTACCAAGGGACCACTGTATGTCGGCGTGAGGGCTGTCACCTCAGACGGTTACTATAGCGACCTTAGCGAAGTACATACGATGGAAATGCAAGATGCAGAGCCTCTAGAAGGTACGTCTAGCGCGGGCGCGGTGTGGTGGGGGGTGGGCGTGTCGTGCGGCGCCGCCCTCCTGATGGCCGGAGCCCTATTACACGTGGTCGTCAAACAGAGGCGAGCTCACGCAAGACTGGCGCACACACCGCGCTACGACAGTCGACGAGGAGAGGCGACTATTGATCACGACGATGACGACGTACCTCCAATCCACGGTTTCTCTGACGACGAACCGCTCGTTATAGCGTAA

Protein sequence:

>DPOGS206596-PA
MLAALGFKISYITLLFIISCALSVEQYAPPSSSLYVAEDPHITKKVTVINRQLGENGKETSERKKREATTVPPQTVDRNISTWTSHLNDSHQQLMVHWVGEGSNVIICLARDSTSRVKDLSPSALYISYDYGKNFTNKTESFHLSDSPDSGYAQLDKFFNHPKYPEFCVFVDSTNKKLYYTQDNGRTIIRSDLNFHPSELAFDEDIPNRYVILDKVDSTRNLYMTFDGGKNFKLIQNYVKTFFWSSGVGYPKAFYVERWKPGGNSTVLTANDPSNMVNAQELFADAKDFQIKGDFMFATKQSKEKNSLDLYISHQRGPFFKANFQTELDLHKFHIADVTDKRIFVSVMHTENLANLYVSEINRNFTQYNFVLSLEQVLCYFPDGNWKDSWLEDVTEDPFTDLYRVEGLKGIYIVSKVNFKSLSFNIEPEHLISLITFDHGVTWSPIVPPSEDENGPARNANCIWPDGSFKLTTNYVYRFHDTPKKNSLDLYISHQRGPFFKANFQTELDLHKFHIADVTDKRIFVSVMHTENLANLYVSEINRNFTQYNFVLSLEQVLCYFPDGNWKDSWLEDVTEDPFTDLYRVEGLKGIYIVSKVNFKSLSFNIEPEHLISLITFDHGVTWSPIVPPSEDENGKPMNCYKENSCSLHLCQKFSQLYPVTSIPGYVVDTEWRSASIMSSKSAPGIIMATGVIGKSLKGIPGVYISRDAGLTWKRILKDYYFFNYGDHGGVLVAVKYFKSRGETRRILYSTNEGIDWQSHQFNADDLRIYGLMTEPGENTTTFTMFGSANEQHQWIIITMDLINTFARNCTESDYKFWSPSPPTSPNSSVSCVLGTRDTFQRRLAHTNCHNGIDYDRPVRKEVCECSRRDYECDFGFILSHNTCVRNQSLVGNDPYAEASDCQPGHYFQRTKGYRKIDGDVCTVSYYMPYEPEMVPCPLSVPTEFLWVALRDKIARIDLSNNTTVIPIKNQQNIVAIEFDMKNNCIYWADIEVDKISRQCFDNGNVQEIVVDTDLASIEGMALDWISNVLFFVDGMRKKIEAVRTDLQSSGRMRATILDSKVLSKPRGIAVHPRAGYLYWTDWDRKNPSVSRSNLDGSNVTKLFTKPIVQWPNGITIDQMSDRIYWVDALEDYIASADLNGQYFRRILWNDEKVSHPFAVAVLKHKMYWDDWKAKSIFTADKDTGADIVTINDKLSGLMDLKVFAYFMQHGSNACSYKNTSCDTLCLGGPRNTFSCLCPDGFKKINGKCMCPNGLEPTPNMTCPKQAGSCSPEEFSCKNGRCIRSTWRCDGNDDCGDGSDEVGCGCAPPRIACDGRCYLPHWRCDGDMDCADNSDEKDCGKQNCTENQFQCANGNCIEKRWVCDGDNDCKDGSDERNCTQSLPKRPVTVNCSGHVFACSNDTNALCIPNSWVCDGERDCLGGEDETEERCTNSTCAPYMFRCPSGKCIYMSWVCDGENDCSDVDSSDEKNCTSIGHSKLIPRPTEKPDFGTKGSCLEWMFKCDNGVCLPYWWRCDGTNDCGDNSDEAACGLRPDNKTHITPEREVKQKCAKNQFTCEPGVCIPLTWVCDSVSDCIDGSDESGCDRRHDKGDTGLRCEPAATPCADGSACIADHQLCDGVIDCGDHSDEMHCGTVNCGKQNCTENQFQCANGNCIEKRWVCDGDNDCKDGSDERNCTQSLPKRPVTVNCSGHVFACSNDTNALCIPNSWVCDGERDCLGGEDETEERCTNSTCAPYMFRCPSGKCIYMSWVCDGENDCSDVDSSDEKNCTSIGHSKLIPRPTEKPDFGTKGSCLEWMFKCDNGVCLPYWWRCDGTNDCGDNSDEAACGLRPDNKTHITPEREVKQKCAKNQFTCEPGVCIPLTWVCDSVSDCIDGSDESGCDRRHDKGDTGLRCEPAATPCADGSACIGDHQLCDGVIDCGDHSDEMHCGTQKPKSPVSCPPRYFECDEGTRCLWQAMVCNWHQDCYDGSDEANCTSNNNNNNVYQYLSIGVDQSSINSTSFLISCWMAQQRTVMYNFLPSISKVDDGVWKNMTWTNDSVYRYIMANERLRLVWYSQLIVIIKSILFISVPSPPQRLTVRQMIGRRVQILWDPPKDPRGVITHYTIYYVPPLPPMEKTVLAGSANKTVSVFLDGYFKPNKNYSFWVTASNNANTSESTPISYLLFDDVGDVDDIVNASMSRLAPTSVSVTWNRLRGIEGYLVDVRLPSQYAKRPVIRTKENSVNITNLPTGVKVYIDIKAYKDNVMGNPFTIPFVTEGVEDETLNVTAVLLKEKRTSVELSWSPPVSDRYKNKKLEYEVHYNNVMQWRMYPGEMVNDTKIVTESNRLVIDGLHACESYLFTVGLVGGPLAAFREIITRENVRAPVKDLNYVFDDKKNTLNITWKANCDVIKDPIAYRLDVEELTHNKFSHFVLNATTNVSLIHTFEDVPVGGRFNICVSASVRDSSVKCIEARSGVVDSPNAVVAWLAPNGHIMVSWKHDEHNYTHKHKYQILVSEKELDEDVLHPGDDVTVVDAEFTPMLLSSHAPTKGPLYVGVRAVTSDGYYSDLSEVHTMEMQDAEPLEGTSSAGAVWWGVGVSCGAALLMAGALLHVVVKQRRAHARLAHTPRYDSRRGEATIDHDDDDVPPIHGFSDDEPLVIA-