Monarch geneset OGS2.0

DPOGS206597
TranscriptDPOGS206597-TA2406 bp
ProteinDPOGS206597-PA801 aa
Genomic positionDPSCF300048 - 1538499-1546981
RNAseq coverage417x (Rank: top 29%)
Annotation
HeliconiusHMEL0216060.075.31% 
BombyxBGIBMGA013794-TA4e-2724.03% 
DrosophilaFas2-PA0.044.60% 
EBI UniRef50UniRef50_O971370.083.08%Fasciclin II transmembrane isoform n=3 Tax=Manduca sexta RepID=O97137_MANSE
NCBI RefSeqNP_525066.10.044.60%fasciclin 2, isoform A [Drosophila melanogaster]
NCBI nr blastpgi|43367260.083.08%fasciclin II transmembrane isoform [Manduca sexta]
NCBI nr blastxgi|43367260.083.08%fasciclin II transmembrane isoform [Manduca sexta]
Group
Gene OntologyGO:00160201.9e-09membrane
GO:00071551.9e-09cell adhesion
GO:00055152.8e-09protein binding
KEGG pathwaydme:Dmel_CG36650.0 
 K06491 (NCAM)maps-> Cell adhesion molecules (CAMs)
    Prion diseases
InterPro domain[163-284] IPR0137836.9e-21Immunoglobulin-like fold
[191-280] IPR0130983e-17Immunoglobulin I-set
[467-598] IPR0089577.9e-14Fibronectin type III domain
[203-270] IPR0035981.1e-11Immunoglobulin subtype 2
[197-281] IPR0035992.9e-10Immunoglobulin subtype
[95-122] IPR0091381.9e-09Neural cell adhesion
[603-683] IPR0039612.8e-09Fibronectin, type III
Orthology groupMCL12040 Multiple-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS206597-TA
ATGCAAAAGCAGCAGACTGTAGCTGTTGGTAAGTCGGTAGTGCTGACATGCCAGGCAGACGCTCCAGATCCCGCACTTGTTACGCAACCACAGTGGAGGGACCCTAAAGGATTGATTATAAACGAGGCTGCAGCTGGGACACGACCTGAAATTTATACGGAACCAATGCCGGCAAAACAGCTTCAATTGCTATACATATCCTCCATAACTACTGCAATGGCGGGCAATTACACCTGCGAAGCTGCATACACCAATATGCCTCTCAGCGCGAGCGTTGTTTTGGACACTTTCGTCGCAATCACATGGAATAATGCTAATGAGAACCAATATGCGACCAAGGGTAAGGATTTTAAAGTCATGTGCGAAGTCACTGCTGAACCAGCTCCATCTGTAGATTGGTTTAAAGAAGGCACTCCTATTATGACTGGCGATCGATATGTCATTCATGCAAATGGGTTGTTGATTAAAAGTGTTGAAGAAAGCGACGATGGCACATATACTTGTCGCGCTGTTGTTATTCAAACTGGTGAATTAGCAGAGAGAAATATTAAACTTGAGGTGTACACAGCTCCTGAAATGGAAGAAAGAGAACATAGAGTTGAAATTAAAGAAGGTGAATCTGCTGCGATTACTTGCAAAGCGAGAGGGAAACCACCACCGACTTATTCCTGGATTAAAGCTTCCACTCGTGAGAATTTGGCAACAACCTCCCGTTTCAGCGTGAACGAAAATACTGGATTGTTAACTTTCGATAGGGTAGAAGCTGGTGATTATGGCAAATATATCTGTAGCGCTGTGAACCAAGCTGGTCACAATGAAACAGAAATCGAAGTAGAAGTGCTCGTTAAACCGAAAATATTCGAGTTACTCAATACAACTGCAGCAGAGAATACTGAGGGAAGATTGGAGTGTAAGGCGTCAGGACGCCCGGCTCCTCGTATAAGTTTTAGGAAACTTAGCAATAATGATAGATTTTTGAATGGACCTAATGATGATGGAAGGATAACCATCGAAACCAGCAGTCGTCAGACAGGCGATCAAATGCAATCAACTGCTTTAATGTCAATTTCGAGGCTCAACAGAACCGATGATGGACTTTATGAATGCGTTGCTGAAAACGAAGGCGGAGAAGCAAGGAAAAATGGCCATCTCACAGTTCAATTCAGACCATCATTGGCCCATATGTCAAACGTACCTATTTGGAGTTGGAATGCACAACCCGTTAATATAAGTTGTATTGCAGAAAGTATACCCAATGCCACTATTAAATGGAAATTCCACGATTATGATCTTGTTGAATCGCCTCACGTCAAGATTTACGGTTCAGGGCCTATCAGTTATGTGACTATAACACCAATCGACCGAAGTCTATATGGCGTATATAAATGTATTGCCACAAATACTCTAGGTGAAGCAGAACATCCTATACATTTCAGAGAAGCATTTGCACCCGGAATCGTCACACAGGCAAGACAAGAAACAATAACCGCGACATCGGTTTCATTTAATATCGTGGGCCCGGCCGAAGAAATGGGACCGCCAATATCGGCTTACACAACCCAATACAAAGAAAACGGAAATTTCGATTGGAATTACGCGATGAATCGAACGTGGTCCGTCAATTCACCGTATATCGTTGAGAATTTGAAACCTATGTTTACATACGACTTTAGATTCGCGGCCGTTAACCAAGTCGGTGTAGGCCAATGGGGTTCTCCGATTACAGTTATCATGCCCAGAAGATCACCACCGGAACAACCAAAGTGGAGAGAGGCAATAAGTTCGGAATCATTAATCCATGGTAAATACGCTGACAAATATGAATTGCAATGGCGAGTGCCTGCCCATAACGGAGAGCCGATTGATATGTATGAGATCAGTTATTGCTCAGTTCTTAAAGTGAGCGGCGAATGGCGTGTATCGGACGAGTCGAACTGCGTTACGGAGGAACTGAAGTCGTATGACGCAATAAGTTATGAGATCCGCAACCTTCATCCGGACACTCGTTACAGGATGCACGTCCGCGCTCACAACGTCCTGGGTTACTCGGTTCCAGCTCAACTTTACGTTCAAACCGCGCTCGGTGTGGAACGTTCTGGATTTGCGCCGCCTAAACTACTTTCAAGTGGAGCTATAATAGGAGTGGCTTTGGCTGGCGTTTTAATTTGCCTCATCATAGTGGACCTTCTACTGCTTTGCTTCCGAAGACAGGGCGTTATTGCAACAATATGTGGCAAACGAGTTAAGAAACACTCGGATGACGAAGCGAAGCTGGGAAGAGATGAAAAGGAACCTCTTAAAGAGACTGGAGAAGACGCCATCAAAAGAAACTCATCGGTAGAATTCGATGGACGTAGAGTATACGCCACCAGTGGAACAATTATTGGCAAAAACTCCGCAGTTTAA

Protein sequence:

>DPOGS206597-PA
MQKQQTVAVGKSVVLTCQADAPDPALVTQPQWRDPKGLIINEAAAGTRPEIYTEPMPAKQLQLLYISSITTAMAGNYTCEAAYTNMPLSASVVLDTFVAITWNNANENQYATKGKDFKVMCEVTAEPAPSVDWFKEGTPIMTGDRYVIHANGLLIKSVEESDDGTYTCRAVVIQTGELAERNIKLEVYTAPEMEEREHRVEIKEGESAAITCKARGKPPPTYSWIKASTRENLATTSRFSVNENTGLLTFDRVEAGDYGKYICSAVNQAGHNETEIEVEVLVKPKIFELLNTTAAENTEGRLECKASGRPAPRISFRKLSNNDRFLNGPNDDGRITIETSSRQTGDQMQSTALMSISRLNRTDDGLYECVAENEGGEARKNGHLTVQFRPSLAHMSNVPIWSWNAQPVNISCIAESIPNATIKWKFHDYDLVESPHVKIYGSGPISYVTITPIDRSLYGVYKCIATNTLGEAEHPIHFREAFAPGIVTQARQETITATSVSFNIVGPAEEMGPPISAYTTQYKENGNFDWNYAMNRTWSVNSPYIVENLKPMFTYDFRFAAVNQVGVGQWGSPITVIMPRRSPPEQPKWREAISSESLIHGKYADKYELQWRVPAHNGEPIDMYEISYCSVLKVSGEWRVSDESNCVTEELKSYDAISYEIRNLHPDTRYRMHVRAHNVLGYSVPAQLYVQTALGVERSGFAPPKLLSSGAIIGVALAGVLICLIIVDLLLLCFRRQGVIATICGKRVKKHSDDEAKLGRDEKEPLKETGEDAIKRNSSVEFDGRRVYATSGTIIGKNSAV-