DPOGS206768 | ||
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Transcript | DPOGS206768-TA | 513 bp |
Protein | DPOGS206768-PA | 170 aa |
Genomic position | DPSCF300001 - 6226051-6226812 | |
RNAseq coverage | 179x (Rank: top 49%) |
Annotation | ||||
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Heliconius | HMEL006196 | 2e-81 | 84.80% |   |
Bombyx | BGIBMGA010841-TA | 1e-73 | 77.06% |   |
Drosophila | mRpS10-PB | 3e-45 | 60.00% |   |
EBI UniRef50 | UniRef50_Q1HQ85 | 1e-71 | 77.06% | Mitochondrial ribosomal protein S10 n=1 Tax=Bombyx mori RepID=Q1HQ85_BOMMO |
NCBI RefSeq | NP_001040362.1 | 3e-72 | 77.06% | mitochondrial ribosomal protein S10 [Bombyx mori] |
NCBI nr blastp | gi|114051477 | 4e-71 | 77.06% | mitochondrial ribosomal protein S10 [Bombyx mori] |
NCBI nr blastx | gi|114051477 | 4e-71 | 77.06% | mitochondrial ribosomal protein S10 [Bombyx mori] |
Group | ||||
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Gene Ontology | GO:0005840 | 3.8e-20 | ribosome | |
GO:0006412 | 3.8e-20 | translation | ||
GO:0005622 | 3.8e-20 | intracellular | ||
GO:0003735 | 3.8e-20 | structural constituent of ribosome | ||
KEGG pathway |   | |||
InterPro domain | [56-154] IPR001848 | 3.8e-20 | Ribosomal protein S10 | |
Orthology group | MCL10851 |   | Multiple-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS206768-TA
ATGAATTCGTTAAGGCATTTATGGCGAACAACATCTATTGTGCGAAATGTACTAGTGAATAACAAAACATTCACAAGGCAACTTGCCACTGCCACTATAACTCCAATAAAACCTATTGAAGATGTACCAAGTCCAGTGGAACTTGACAAACTTTACAAGAGAGTGGAGTTAGAAATGCGGGGTATAGATCCCGCTGTCTTACTCAGCTACTCCTGGTTCTGTATTGCTGCTGCCTCTCATTTAGGCATAGAAGTCACTAAAAGCTGGGCGCTAAGGAAAGCAGAGAAAGAAAGGCACACGCTGCTAAGATGCGTCCACATTTACAAAAAACACAGAGTACAATATGAAATCAGGACATACTTTAGATTTGTTCACCTTCAACGGCTGACAGGATCTACCTGTGACACATATTTAGAATACATACAGAGAAACCTTCCGGAAGGATGCGCTTTGAAAGTCACTAAAGTTGAATGTCAGAATTTACCGGAACATTTGACACCGCCAAAGGAATAA
>DPOGS206768-PA
MNSLRHLWRTTSIVRNVLVNNKTFTRQLATATITPIKPIEDVPSPVELDKLYKRVELEMRGIDPAVLLSYSWFCIAAASHLGIEVTKSWALRKAEKERHTLLRCVHIYKKHRVQYEIRTYFRFVHLQRLTGSTCDTYLEYIQRNLPEGCALKVTKVECQNLPEHLTPPKE-