DPOGS206778 | ||
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Transcript | DPOGS206778-TA | 801 bp |
Protein | DPOGS206778-PA | 266 aa |
Genomic position | DPSCF300001 - 5863641-5881531 | |
RNAseq coverage | 42x (Rank: top 72%) |
Annotation | ||||
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Heliconius | HMEL006176 | 8e-129 | 87.45% |   |
Bombyx | BGIBMGA010695-TA | 5e-73 | 96.43% |   |
Drosophila | Dr-PA | 7e-41 | 71.19% |   |
EBI UniRef50 | UniRef50_Q58Y76 | 7e-64 | 57.55% | Muscle segment homeodomain protein n=2 Tax=Tribolium castaneum RepID=Q58Y76_TRICA |
NCBI RefSeq | NP_001034495.1 | 1e-64 | 57.55% | muscle segment homeodomain protein [Tribolium castaneum] |
NCBI nr blastp | gi|270014052 | 3e-64 | 57.55% | hypothetical protein TcasGA2_TC012748 [Tribolium castaneum] |
NCBI nr blastx | gi|270014052 | 4e-64 | 58.90% | hypothetical protein TcasGA2_TC012748 [Tribolium castaneum] |
Group | ||||
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Gene Ontology | GO:0006355 | 2e-24 | regulation of transcription, DNA-dependent | |
GO:0043565 | 2e-24 | sequence-specific DNA binding | ||
GO:0003700 | 2e-24 | sequence-specific DNA binding transcription factor activity | ||
GO:0003677 | 1.3e-22 | DNA binding | ||
GO:0005515 | 9.3e-22 | protein binding | ||
KEGG pathway |   | |||
InterPro domain | [143-205] IPR001356 | 2e-24 | Homeobox | |
[128-203] IPR012287 | 1.3e-22 | Homeodomain-related | ||
[117-204] IPR009057 | 9.3e-22 | Homeodomain-like | ||
[165-176] IPR020479 | 1.8e-06 | Homeobox, eukaryotic | ||
Orthology group | MCL18365 |   | Insect specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS206778-TA
ATGAAGACTTCGCTTGAATGCGAGCGGTCCGAGGCCGCTGAGAGCGGTAAGGGTCGTATATCGTTTAGCGTAGATGCCTTACTTGGCAGCAAGAGCGACACGACCAGAAACACGCCTGACGCAGTCAGCAATGACGCCGAGAGCGCTGTTGAATCTGACGATAGTGACGTTGATATAGAAGACGTCGAGTCTAATGTCGGTGATGACAGGGATGACAGAGAAGCGAACGATGATGATGAAGCCAGGAGCGGGGTGGTCGTACCACAGCCCCTCCTGCCAAGGATCTACCAGGGGCCCTCGCACGCCTGGCCGTTTGGAGCCTTCCCATGGATGGCGCCCAACCCTATGTTCAGGGCTGGCTCTCCTAACGCAGGAGCTCCGAGCGGTCCGCCCGTAGTCCGCTGTCAGTTAAGGAAACACAAGCCCAACAGGAAGCCGAGAACACCGTTCACAACACAGCAGCTCCTGGCCTTGGAGAAGAAGTTCAGGGACAAACAGTACCTGAGCATCGCGGAGAGAGCTGAATTCTCATCGTCATTGAGACTGACGGAAACTCAGGTGAAAATATGGTTCCAAAACCGGCGAGCGAAAGCCAAGCGTCTACAGGAAGCGGAGATAGAAAAACTTCGTCTCTCAGCTCGTCCTCTCCTACCGCCTTCGTTCGCGCTGTTCGGAGGTGGAACACCACCACTGTTCGCCGCCATGGCCGCGGCGAGACCGCAGCTCAGCTTCCTGGGCGGCCCGCCCACGCACCAACACGCCATCAACATGAACATACTCAACTCCCTCCAACCGCATTGA
>DPOGS206778-PA
MKTSLECERSEAAESGKGRISFSVDALLGSKSDTTRNTPDAVSNDAESAVESDDSDVDIEDVESNVGDDRDDREANDDDEARSGVVVPQPLLPRIYQGPSHAWPFGAFPWMAPNPMFRAGSPNAGAPSGPPVVRCQLRKHKPNRKPRTPFTTQQLLALEKKFRDKQYLSIAERAEFSSSLRLTETQVKIWFQNRRAKAKRLQEAEIEKLRLSARPLLPPSFALFGGGTPPLFAAMAAARPQLSFLGGPPTHQHAINMNILNSLQPH-