DPOGS206794 | ||
---|---|---|
Transcript | DPOGS206794-TA | 249 bp |
Protein | DPOGS206794-PA | 82 aa |
Genomic position | DPSCF300001 - 4670136-4671561 | |
RNAseq coverage | 262x (Rank: top 41%) |
Annotation | ||||
---|---|---|---|---|
Heliconius | % |   | ||
Bombyx | % |   | ||
Drosophila | Syx6-PE | 7e-18 | 68.97% |   |
EBI UniRef50 | UniRef50_Q7JRF1 | 2e-22 | 71.43% | RE48509p n=10 Tax=Coelomata RepID=Q7JRF1_DROME |
NCBI RefSeq | NP_001108474.1 | 3e-30 | 85.92% | syntaxin 6 [Bombyx mori] |
NCBI nr blastp | gi|169234706 | 7e-29 | 85.92% | syntaxin 6 [Bombyx mori] |
NCBI nr blastx | gi|169234706 | 2e-28 | 85.92% | syntaxin 6 [Bombyx mori] |
Group | ||||
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Gene Ontology | GO:0016020 | 6e-18 | membrane | |
GO:0048193 | 6e-18 | Golgi vesicle transport | ||
GO:0016192 | 1.4e-17 | vesicle-mediated transport | ||
KEGG pathway | tca:655837 | 6e-23 |   | |
  | K08498 (STX6) | maps-> | SNARE interactions in vesicular transport | |
InterPro domain | [5-69] IPR015260 | 6e-18 | Syntaxin 6, N-terminal | |
[4-69] IPR010989 | 1.4e-17 | t-SNARE | ||
Orthology group | MCL26643 |   | Patchy |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS206794-TA
ATGACTCTAGAAGATCCCTTCTACGTCGTAAAAGATGAGGTGTTCCGTGCGTTGAACAAGACTCGCGGTTTGTATCTTCGCTGGCAGGAAGTAACTCGTACACCTATAGTTCACAGCCCAGAAGCCGAGTGGACTTCGACAGAACTCAAGAACGCTATACGAAGCATCGAATGGGACTTGGAAGACCTTGAAGACACAATCAATATCCTTTTTAGCATACATATCAGATTGGATGCATTTATCAAATGA
>DPOGS206794-PA
MTLEDPFYVVKDEVFRALNKTRGLYLRWQEVTRTPIVHSPEAEWTSTELKNAIRSIEWDLEDLEDTINILFSIHIRLDAFIK-