Monarch geneset OGS2.0

DPOGS206844
TranscriptDPOGS206844-TA867 bp
ProteinDPOGS206844-PA288 aa
Genomic positionDPSCF300001 - 3072670-3073536
RNAseq coverage125x (Rank: top 57%)
Annotation
HeliconiusHMEL0132871e-11968.75% 
BombyxBGIBMGA012574-TA2e-6045.20% 
DrosophilaCG7675-PB3e-6345.77% 
EBI UniRef50UniRef50_Q9VE805e-6145.77%CG7675, isoform B n=17 Tax=cellular organisms RepID=Q9VE80_DROME
NCBI RefSeqXP_798545.26e-6644.14%PREDICTED: similar to RDH13 [Strongylocentrotus purpuratus]
NCBI nr blastpgi|1156579771e-6444.14%PREDICTED: similar to RDH13 [Strongylocentrotus purpuratus]
NCBI nr blastxgi|1950289938e-6649.64%GH21883 [Drosophila grimshawi]
Group
Gene OntologyGO:00054888.1e-73binding
GO:00081527.7e-22metabolic process
GO:00164917.7e-22oxidoreductase activity
KEGG pathway 
InterPro domain[1-275] IPR0160408.1e-73NAD(P)-binding domain
[4-145] IPR0021987.7e-22Short-chain dehydrogenase/reductase SDR
[5-22] IPR0023472.4e-18Glucose/ribitol dehydrogenase
Orthology groupMCL34682 Lepidoptera specific
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS206844-TA
ATGAGTGGAAAAGTGGTTGTGGTGACCGGAGCTAGCGGTGGAATCGGCTTCGAGACGGCGCTAGAGCTGGCGAGGAGGGGAGCCAAGGTTATCGTAGCGTGCAGAAACCATGAGAAGGGTCAGACAGCTGTTCGCAGAATCATCAAGAGGACCAATAATAATAGGATACATTACATACATTTAGATCTCACATCTTTACAATCAATAAGAAACTTTGTAGACCAGTTCAAGTCAAGGGAAGCTAAGCTAGATGTTCTCATCAACAACGCCGGCGCTATACTGACATCCAGGGAGAGAACTGAAGACGGTATCCTAAAGGATTTGCAGATCAATTACTTCGGACCGTTTCTATTGACCGTACTACTGGTGCCGATGCTGAAAAAGGCATCGCCTAGTCGTGTAGTCATCGTGTCGTCCTCGTGGCATAAATTCGGTACAGTCAATGAACTGAACAGCGATAGACATGGTTATATACAGGCGTACGCTAATAGCAAGTTGTGTAATATTATGTTTTGTAAGGAGCTGTCCAAGCGTCTGGAGGGCACGGGAGTGGTTGTCAACAGTTTAAACCCCGGCCTCGTGAACACATCTTTGTACAGAAGCTCAACAGCCCTGGAGAAGTTGAGGAGTTTGATGCTATACGCTTTCTTTAAAACACCAGAAGAGGGCGCGCAGACGTCTTTATATTTAGCTGTCGATATCGAATGCGATCAGGTTACCGGAAAGTACTTCGAAGACTGCAAGGAAGCCCGACCGTCCTATAAGACTGATGATGAAGAGACAAGAGACAAGTTGTGGGAATTATCAAAGGATCTCGTAAAATTGACACCGGAGGAAATCAGTCAATGTTTTAATGATACCACATGA

Protein sequence:

>DPOGS206844-PA
MSGKVVVVTGASGGIGFETALELARRGAKVIVACRNHEKGQTAVRRIIKRTNNNRIHYIHLDLTSLQSIRNFVDQFKSREAKLDVLINNAGAILTSRERTEDGILKDLQINYFGPFLLTVLLVPMLKKASPSRVVIVSSSWHKFGTVNELNSDRHGYIQAYANSKLCNIMFCKELSKRLEGTGVVVNSLNPGLVNTSLYRSSTALEKLRSLMLYAFFKTPEEGAQTSLYLAVDIECDQVTGKYFEDCKEARPSYKTDDEETRDKLWELSKDLVKLTPEEISQCFNDTT-