Monarch geneset OGS2.0

DPOGS206875
TranscriptDPOGS206875-TA840 bp
ProteinDPOGS206875-PA279 aa
Genomic positionDPSCF300001 - 2266614-2276716
RNAseq coverage2756x (Rank: top 4%)
Annotation
HeliconiusHMEL0101982e-4081.55% 
BombyxBGIBMGA012833-TA1e-7364.88% 
DrosophilaRbp2-PC9e-2948.05% 
EBI UniRef50UniRef50_F4WRF42e-4243.79%Eukaryotic translation initiation factor 4H n=6 Tax=Endopterygota RepID=F4WRF4_ACREC
NCBI RefSeqXP_392894.14e-5048.04%PREDICTED: similar to RNA-binding protein 2 CG4429-PA, isoform A [Apis mellifera]
NCBI nr blastpgi|481037617e-4948.04%PREDICTED: eukaryotic translation initiation factor 4H-like [Apis mellifera]
NCBI nr blastxgi|1129831242e-10269.72%eukaryotic translation initiation factor 4H [Bombyx mori]
Group
Gene OntologyGO:00001661.9e-13nucleotide binding
GO:00036769.5e-12nucleic acid binding
KEGG pathwayang:An15g067904e-16 
 K03258 (eIF-4B, EIF4B)maps-> mTOR signaling pathway
InterPro domain[26-114] IPR0126771.9e-13Nucleotide-binding, alpha-beta plait
[34-106] IPR0005049.5e-12RNA recognition motif domain
Orthology groupMCL12975 Single-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS206875-TA
ATGGCAGGTCGCAGTGGTTTTGACGATGGTAATCCGAGGGACTATGGAGGCGGCAGGAGAACTGTGGGCGGCCGTCCTCTCCCAACCGAACCACCATACAAGGCCTACGTTGGGAACTTACCCTCTGGTCTCATTCAAGGCGATATTAACAGAATCTTTCCAAATCTGGCCGTTAAAAATGTCCGGCTGGTTATGGATAAGGAAACAGATCTATTCAAAGGATTTTGCTATGTGGAATTTGAGTATCTCAATGATCTCATAAAAGCAATCGAAATGAATGGTTCTCTAAAGGTAGATGATAAATTTGTAAAAATTGATGTTGCGGAAGAAAAAAGGAATGATAGAGGAGGTGGCTTCGATCGGGGCAGACGCGAGGGTCGTGATGGCGGGAGGGACGGTCGTGGTGGGTTCCGGCGAGAGGGAGGTGGCCGTGGTACGTACGACGACAGGAGGACCCCGGGGTTCACACATGAACGCGAGCGTGGCGGCGGGGCGAGCGGGGAGCGATGGAACGACCGTGGCGGGGAGCGGCCGGAGCGCGGGGGTGAGAGGTGGAATGAGCGCGGCGGGGAGAGGGGTGCGAGAGGGGGCAGTGAGGAACCCCGCGGGGGAGACTGGGGGAGGATGGGGAGACAGCCGTCAGCACCCAGGCAGCAGCCACGTCGCTTTGACGACATGCCGCCAGCCAGAGCCGACACATCAGGTAGACCGAAGCTGGTACTGGAGCCGCGGACGGTGAAGGAGCCTGTCAACTCGCTGGCTGCCACAAGCCAGGCCTCCTCTATATTCGGCGGCGCCCGGCCGAGGGAGGAACGACTCAAAGAACTCGCCGAGGAATAG

Protein sequence:

>DPOGS206875-PA
MAGRSGFDDGNPRDYGGGRRTVGGRPLPTEPPYKAYVGNLPSGLIQGDINRIFPNLAVKNVRLVMDKETDLFKGFCYVEFEYLNDLIKAIEMNGSLKVDDKFVKIDVAEEKRNDRGGGFDRGRREGRDGGRDGRGGFRREGGGRGTYDDRRTPGFTHERERGGGASGERWNDRGGERPERGGERWNERGGERGARGGSEEPRGGDWGRMGRQPSAPRQQPRRFDDMPPARADTSGRPKLVLEPRTVKEPVNSLAATSQASSIFGGARPREERLKELAEE-