| DPOGS206895 | ||
|---|---|---|
| Transcript | DPOGS206895-TA | 465 bp |
| Protein | DPOGS206895-PA | 154 aa |
| Genomic position | DPSCF300001 - 1815775-1816627 | |
| RNAseq coverage | 1201x (Rank: top 11%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL005107 | 5e-27 | 42.86% | |
| Bombyx | BGIBMGA012852-TA | 5e-87 | 98.70% | |
| Drosophila | UbcD10-PA | 1e-74 | 83.12% | |
| EBI UniRef50 | UniRef50_P68036 | 1e-74 | 83.77% | Ubiquitin-conjugating enzyme E2 L3 n=207 Tax=Eukaryota RepID=UB2L3_HUMAN |
| NCBI RefSeq | NP_001037390.1 | 1e-85 | 98.70% | ubiquitin-conjugating enzyme E2L [Bombyx mori] |
| NCBI nr blastp | gi|112983864 | 3e-84 | 98.70% | ubiquitin-conjugating enzyme E2L [Bombyx mori] |
| NCBI nr blastx | gi|112983864 | 2e-84 | 98.70% | ubiquitin-conjugating enzyme E2L [Bombyx mori] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0016881 | 2.2e-43 | acid-amino acid ligase activity | |
| KEGG pathway | tca:660484 | 5e-81 | ||
| K04552 (UBE2L3, UBCH7) | maps-> | Ubiquitin mediated proteolysis | ||
| Parkinson's disease | ||||
| InterPro domain | [2-148] IPR016135 | 2.8e-50 | Ubiquitin-conjugating enzyme/RWD-like | |
| [6-142] IPR000608 | 2.2e-43 | Ubiquitin-conjugating enzyme, E2 | ||
| Orthology group | MCL12856 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS206895-TA
ATGGCTGCAACACGGAGACTTCAAAAGGAACTAAACGATATCAGACAATCAGGACTGAAATCTTTTAGAGATATCCAAGTTGATGAGTCGAATATTCTAACATGGCAAGGGTTAATTGTTCCTGACAATCCCCCGTACAACAAAGGTGCCTTTCGTATTGAAATAAACTTTCCAGCTGAATATCCATTTAAACCCCCTAAGATAAGTTTCAAAACAAGAATTTATCATCCTAATATAGATGAAAAAGGCCAAGTTTGCCTTCCCATCATTAGTGCAGAAAATTGGAAACCAGCTACAAAGACTGATCAAGTGATTCAAGCTCTAGTAGCTCTTGTAAATGATCCCGAACCTGAACATCCATTGCGGGCTGAACTAGCCGAAGAATTCCTTAAAGATAGGAAAAAGTTTTCAAAAAATGCTGAAGAATTTACTAAGAAACATAGTGAAAAGCGGCCTACTGATTAG
>DPOGS206895-PA
MAATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIVPDNPPYNKGAFRIEINFPAEYPFKPPKISFKTRIYHPNIDEKGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFSKNAEEFTKKHSEKRPTD-