| DPOGS206902 | ||
|---|---|---|
| Transcript | DPOGS206902-TA | 255 bp |
| Protein | DPOGS206902-PA | 84 aa |
| Genomic position | DPSCF300001 - 1732584-1733362 | |
| RNAseq coverage | 16131x (Rank: top 1%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL009409 | 4e-28 | 73.81% | |
| Bombyx | BGIBMGA012857-TA | 3e-32 | 78.57% | |
| Drosophila | CG30354-PA | 9e-22 | 58.75% | |
| EBI UniRef50 | UniRef50_Q1HR18 | 8e-20 | 58.75% | Mitochondrial ubiquinol-cytochrome c reductase hinge protein n=11 Tax=Endopterygota RepID=Q1HR18_AEDAE |
| NCBI RefSeq | XP_002052969.1 | 2e-21 | 63.29% | GJ23592 [Drosophila virilis] |
| NCBI nr blastp | gi|27461086 | 2e-23 | 70.24% | ubiquinol-cytochrome C reductase complex protein [Spodoptera litura] |
| NCBI nr blastx | gi|27461086 | 7e-29 | 72.62% | ubiquinol-cytochrome C reductase complex protein [Spodoptera litura] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0008121 | 1.2e-23 | ubiquinol-cytochrome-c reductase activity | |
| GO:0006122 | 1.2e-23 | mitochondrial electron transport, ubiquinol to cytochrome c | ||
| KEGG pathway | dme:Dmel_CG30354 | 1e-19 | ||
| K00416 (QCR6, UQCRH) | maps-> | Huntington's disease | ||
| Oxidative phosphorylation | ||||
| Alzheimer's disease | ||||
| Cardiac muscle contraction | ||||
| Parkinson's disease | ||||
| InterPro domain | [20-84] IPR023184 | 2.3e-26 | Ubiquinol-cytochrome C reductase hinge domain | |
| [12-84] IPR003422 | 1.2e-23 | Cytochrome b-c1 complex, subunit 6 | ||
| Orthology group | MCL12563 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS206902-TA
ATGGCTGAAAAACTTATTCCTGTGGTGAAGGCTGATGAAGAAGAAGAGGAGGAATTAGTGGACCCTCAGCAGGCGTTGAGGGATGAATGTAGCCAAAAGCAGGAGGCTCAAAGCTTCTGGACAAAATACCAAGAATGCAATAATCGTGTGAATTCAAAATCAAACACCGCAGAGACCTGTGAAGAGGAACTCATAGATTACGTTCATGCCCTTGACAAGTGTGTCAACAAAGACCTCTTCAAGCGGCTTAAGTAG
>DPOGS206902-PA
MAEKLIPVVKADEEEEEELVDPQQALRDECSQKQEAQSFWTKYQECNNRVNSKSNTAETCEEELIDYVHALDKCVNKDLFKRLK-