DPOGS206906 | ||
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Transcript | DPOGS206906-TA | 537 bp |
Protein | DPOGS206906-PA | 178 aa |
Genomic position | DPSCF300001 - 1668613-1670144 | |
RNAseq coverage | 1922x (Rank: top 6%) |
Annotation | ||||
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Heliconius | HMEL009415 | 3e-79 | 86.03% |   |
Bombyx | BGIBMGA012860-TA | 4e-76 | 86.59% |   |
Drosophila | HP1b-PB | 6e-50 | 61.49% |   |
EBI UniRef50 | UniRef50_G7YNK4 | 3e-49 | 50.98% | Chromobox protein 1 n=3 Tax=Digenea RepID=G7YNK4_CLOSI |
NCBI RefSeq | NP_001159616.1 | 2e-75 | 87.15% | heterochromatin protein 1beta-like protein [Bombyx mori] |
NCBI nr blastp | gi|261245093 | 3e-74 | 87.15% | heterochromatin protein 1beta-like protein [Bombyx mori] |
NCBI nr blastx | gi|261245093 | 7e-88 | 87.15% | heterochromatin protein 1beta-like protein [Bombyx mori] |
Group | ||||
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Gene Ontology | GO:0005634 | 3.4e-31 | nucleus | |
KEGG pathway |   | |||
InterPro domain | [111-167] IPR008251 | 3.4e-31 | Chromo shadow | |
[107-169] IPR018125 | 1.8e-29 | Chromo shadow, subgroup | ||
[98-167] IPR016197 | 4.6e-26 | Chromo domain-like | ||
[15-67] IPR000953 | 5.6e-20 | Chromo domain/shadow | ||
[16-64] IPR023780 | 8.9e-19 | Chromo domain | ||
[13-21] IPR017984 | 6.2e-10 | Chromo domain subgroup | ||
Orthology group | MCL10791 |   | Multiple-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS206906-TA
ATGGCTGATAAGAAAAAAGATGCTGAACCGGAGGGTGAGGAAGAATTTTCCGTAGAAAAAGTTTTAGATCGACGCGTTAGGAATGGAAAGGTCGAGTATTTTTTGAAGTGGAAAGGCTACAGTGACGAAGACAACACCTGGGAGCCTGAAGAAAATCTTGACTGTCCTGATCTCATACAAGCCTTCGAAGAGGCGCGAAAGAAGAAGGAAGCGGGAGGCAAAGGACCCAGATCCGATAAGGATAAGAAAAGAAAATCTGCAGCAGCCACACCCGACTTAAAAGGTGCCAAGAAAGGAAAAACTGATGACAAAAAGACATCCGGCTTTGAACGTGGACTGGAACCAGAGAAGATTATTGGAGCGACGGACAGCAGTGGAGAGTTAATGTTCCTTATGAAATGGCAAGGTACGGATGAAGCTGATTTAGTGCCGGCTAAGCAAGCTAATGTCAAGTGTCCACAGGTTGTGATACAGTTCTACGAGGAACGACTAACATGGCACACACCATCTGCTGACGAGGGAAATAATGATGATTAG
>DPOGS206906-PA
MADKKKDAEPEGEEEFSVEKVLDRRVRNGKVEYFLKWKGYSDEDNTWEPEENLDCPDLIQAFEEARKKKEAGGKGPRSDKDKKRKSAAATPDLKGAKKGKTDDKKTSGFERGLEPEKIIGATDSSGELMFLMKWQGTDEADLVPAKQANVKCPQVVIQFYEERLTWHTPSADEGNNDD-