Monarch geneset OGS2.0

DPOGS206916
TranscriptDPOGS206916-TA651 bp
ProteinDPOGS206916-PA216 aa
Genomic positionDPSCF300001 - 1433050-1436755
RNAseq coverage33x (Rank: top 75%)
Annotation
HeliconiusHMEL0106338e-7666.67% 
BombyxBGIBMGA013015-TA1e-6156.61% 
DrosophilaCG2663-PB4e-5550.79% 
EBI UniRef50UniRef50_F4WQ281e-6157.14%Alpha-tocopherol transfer protein-like protein n=10 Tax=Endopterygota RepID=F4WQ28_ACREC
NCBI RefSeqXP_624151.16e-6458.20%PREDICTED: similar to CG2663-PB, isoform B [Apis mellifera]
NCBI nr blastpgi|3800136187e-6358.20%PREDICTED: uncharacterized protein LOC100864938 [Apis florea]
NCBI nr blastxgi|664990887e-6258.20%PREDICTED: alpha-tocopherol transfer protein-like [Apis mellifera]
Group
Gene OntologyGO:00068102.2e-09transport
GO:00056222.2e-09intracellular
GO:00052152.2e-09transporter activity
KEGG pathway 
InterPro domain[37-185] IPR0012515.9e-31Cellular retinaldehyde-binding/triple function, C-terminal
[85-106] IPR0010712.2e-09Cellular retinaldehyde binding/alpha-tocopherol transport
Orthology group 
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS206916-TA
ATGGACTCGTGTTCCGTTGAAAAAGACGTCACTTATATCAAGGAATGGCTTAAGAAGGAACCACATTTACCTAATGAATTTGGCGTGGAAAGGCACGTACAACCGCCGAACGTAGCGAACGCTTTTAAAGTGGCACTTATGTTTGCTGACCTCAGACTTAAAGGGGAATCAGAAGAAGTAGATGGGGATGTTTATATATTGGACGCAGATGTGGCCACTGTCAACCATTTCGCAAGATTTACACCAATGTTGATCAAGAAGTTTCTTCTATGTATACAGGCGAGTGAAGCGTACCCAATAAAATTAAAGCAAGTTCACGTAATAAACATTTCGCCGATAGTTGAAAAAATTATAAATTTCGTGATGCCGTTTCTAAAAGAAAAAATCAGACAAAGGGTATTTGTTCACACTGATGTAAATGACCTCTACAAGCATGTACCACAGGAGATAATGCCAACCGATTATGGAGGGAAAGTTGGATCAATGAATGATATTTACCATGCTTGGATAAAGAAAACTGAAGAAAGTAAAGGCTGGTTTTCGGAACAAGACAAATACAGAAGTGACGAAAGTCGTAGACCTGGAAGACCTAAAAATCATGATGAACTCTTCGGTTTAACGGGTTCTTTCCGTCAATTAGACATAGACTAA

Protein sequence:

>DPOGS206916-PA
MDSCSVEKDVTYIKEWLKKEPHLPNEFGVERHVQPPNVANAFKVALMFADLRLKGESEEVDGDVYILDADVATVNHFARFTPMLIKKFLLCIQASEAYPIKLKQVHVINISPIVEKIINFVMPFLKEKIRQRVFVHTDVNDLYKHVPQEIMPTDYGGKVGSMNDIYHAWIKKTEESKGWFSEQDKYRSDESRRPGRPKNHDELFGLTGSFRQLDID-