DPOGS206916 | ||
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Transcript | DPOGS206916-TA | 651 bp |
Protein | DPOGS206916-PA | 216 aa |
Genomic position | DPSCF300001 - 1433050-1436755 | |
RNAseq coverage | 33x (Rank: top 75%) |
Annotation | ||||
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Heliconius | HMEL010633 | 8e-76 | 66.67% |   |
Bombyx | BGIBMGA013015-TA | 1e-61 | 56.61% |   |
Drosophila | CG2663-PB | 4e-55 | 50.79% |   |
EBI UniRef50 | UniRef50_F4WQ28 | 1e-61 | 57.14% | Alpha-tocopherol transfer protein-like protein n=10 Tax=Endopterygota RepID=F4WQ28_ACREC |
NCBI RefSeq | XP_624151.1 | 6e-64 | 58.20% | PREDICTED: similar to CG2663-PB, isoform B [Apis mellifera] |
NCBI nr blastp | gi|380013618 | 7e-63 | 58.20% | PREDICTED: uncharacterized protein LOC100864938 [Apis florea] |
NCBI nr blastx | gi|66499088 | 7e-62 | 58.20% | PREDICTED: alpha-tocopherol transfer protein-like [Apis mellifera] |
Group | ||||
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Gene Ontology | GO:0006810 | 2.2e-09 | transport | |
GO:0005622 | 2.2e-09 | intracellular | ||
GO:0005215 | 2.2e-09 | transporter activity | ||
KEGG pathway |   | |||
InterPro domain | [37-185] IPR001251 | 5.9e-31 | Cellular retinaldehyde-binding/triple function, C-terminal | |
[85-106] IPR001071 | 2.2e-09 | Cellular retinaldehyde binding/alpha-tocopherol transport | ||
Orthology group |   |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS206916-TA
ATGGACTCGTGTTCCGTTGAAAAAGACGTCACTTATATCAAGGAATGGCTTAAGAAGGAACCACATTTACCTAATGAATTTGGCGTGGAAAGGCACGTACAACCGCCGAACGTAGCGAACGCTTTTAAAGTGGCACTTATGTTTGCTGACCTCAGACTTAAAGGGGAATCAGAAGAAGTAGATGGGGATGTTTATATATTGGACGCAGATGTGGCCACTGTCAACCATTTCGCAAGATTTACACCAATGTTGATCAAGAAGTTTCTTCTATGTATACAGGCGAGTGAAGCGTACCCAATAAAATTAAAGCAAGTTCACGTAATAAACATTTCGCCGATAGTTGAAAAAATTATAAATTTCGTGATGCCGTTTCTAAAAGAAAAAATCAGACAAAGGGTATTTGTTCACACTGATGTAAATGACCTCTACAAGCATGTACCACAGGAGATAATGCCAACCGATTATGGAGGGAAAGTTGGATCAATGAATGATATTTACCATGCTTGGATAAAGAAAACTGAAGAAAGTAAAGGCTGGTTTTCGGAACAAGACAAATACAGAAGTGACGAAAGTCGTAGACCTGGAAGACCTAAAAATCATGATGAACTCTTCGGTTTAACGGGTTCTTTCCGTCAATTAGACATAGACTAA
>DPOGS206916-PA
MDSCSVEKDVTYIKEWLKKEPHLPNEFGVERHVQPPNVANAFKVALMFADLRLKGESEEVDGDVYILDADVATVNHFARFTPMLIKKFLLCIQASEAYPIKLKQVHVINISPIVEKIINFVMPFLKEKIRQRVFVHTDVNDLYKHVPQEIMPTDYGGKVGSMNDIYHAWIKKTEESKGWFSEQDKYRSDESRRPGRPKNHDELFGLTGSFRQLDID-