DPOGS206922 | ||
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Transcript | DPOGS206922-TA | 531 bp |
Protein | DPOGS206922-PA | 176 aa |
Genomic position | DPSCF300001 - 1339166-1340233 | |
RNAseq coverage | 563x (Rank: top 22%) |
Annotation | ||||
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Heliconius | HMEL010622 | 1e-96 | 93.75% |   |
Bombyx | BGIBMGA012893-TA | 2e-78 | 91.28% |   |
Drosophila | Bet3-PA | 1e-75 | 72.47% |   |
EBI UniRef50 | UniRef50_Q2F629 | 2e-92 | 92.66% | Trafficking protein particle complex subunit 3 n=5 Tax=Endopterygota RepID=Q2F629_BOMMO |
NCBI RefSeq | NP_001040170.1 | 3e-93 | 92.66% | trafficking protein particle complex subunit 3 [Bombyx mori] |
NCBI nr blastp | gi|114051652 | 5e-92 | 92.66% | trafficking protein particle complex subunit 3 [Bombyx mori] |
NCBI nr blastx | gi|114051652 | 6e-89 | 92.66% | trafficking protein particle complex subunit 3 [Bombyx mori] |
Group | ||||
---|---|---|---|---|
Gene Ontology | GO:0005488 | 7.2e-45 | binding | |
KEGG pathway |   | |||
InterPro domain | [1-176] IPR016721 | 6e-93 | TRAPP I complex, Bet3 | |
[11-168] IPR024096 | 7.2e-45 | NO signalling/Golgi transport ligand-binding domain | ||
[18-161] IPR007194 | 7.1e-29 | Transport protein particle (TRAPP) component | ||
Orthology group | MCL14151 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS206922-TA
ATGTCTCGTCAAACTTCAAGACTCGATGCGAAGAAAGTGAATTCTGAATTATTAACACTTACGTATGGAGCATTGGTATCACAAATGTTGAAAGAGATAGATAATCCTGAGGATGTCAACAAACAATTGGAACGCATTGGTTACAATATGGGCGTTCGTCTTATCGAGGATTTTCTAGCCCGGACACCTTCTACACGATGCCTCGAAATGCGGGAGACTGCTGATAAGATACAACAGGCTTTCAGATTATATTTAAACATGCAGCCGGTTGTAACAAGTTGGAGCAGTGCTGGTGATGAATTTTCATTAGTATGGGACCAGTGTCCATTAAGTGAGTGGGTTGAAATGCCCAATAATGGGCTTAAGTATTGCGCTTTGATACCTGGAGCTATCAGAGGTGCTTTACAGATGGTGCAGCTAGATGTGCAGTGCTGGTTTGTACAGGATTTACTTAAAGGTGATCCTATCACTGAGCTGAGAGTGAAGTATATTAAGAGATTAGAAGACGCTGTGCCAGCTGGTGAAGACTAA
>DPOGS206922-PA
MSRQTSRLDAKKVNSELLTLTYGALVSQMLKEIDNPEDVNKQLERIGYNMGVRLIEDFLARTPSTRCLEMRETADKIQQAFRLYLNMQPVVTSWSSAGDEFSLVWDQCPLSEWVEMPNNGLKYCALIPGAIRGALQMVQLDVQCWFVQDLLKGDPITELRVKYIKRLEDAVPAGED-