DPOGS206948 | ||
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Transcript | DPOGS206948-TA | 690 bp |
Protein | DPOGS206948-PA | 229 aa |
Genomic position | DPSCF300001 - 361330-362639 | |
RNAseq coverage | 569x (Rank: top 22%) |
Annotation | ||||
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Heliconius | HMEL014368 | 2e-102 | 77.63% |   |
Bombyx | BGIBMGA012954-TA | 4e-89 | 71.24% |   |
Drosophila | bonsai-PA | 2e-41 | 38.33% |   |
EBI UniRef50 | UniRef50_Q8WTC1 | 3e-39 | 38.33% | 28S ribosomal protein S15, mitochondrial n=19 Tax=Endopterygota RepID=RT15_DROME |
NCBI RefSeq | XP_001649689.1 | 2e-49 | 43.32% | 28S ribosomal protein S15, mitochondrial precursor [Aedes aegypti] |
NCBI nr blastp | gi|157107244 | 3e-48 | 43.32% | 28S ribosomal protein S15, mitochondrial precursor [Aedes aegypti] |
NCBI nr blastx | gi|157107244 | 5e-51 | 42.15% | 28S ribosomal protein S15, mitochondrial precursor [Aedes aegypti] |
Group | ||||
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Gene Ontology | GO:0005840 | 6.4e-08 | ribosome | |
GO:0006412 | 6.4e-08 | translation | ||
GO:0005622 | 6.4e-08 | intracellular | ||
GO:0003735 | 6.4e-08 | structural constituent of ribosome | ||
KEGG pathway | tna:CTN_1247 | 5e-07 |   | |
  | K02956 (RP-S15, rpsO) | maps-> | Ribosome | |
InterPro domain | [37-124] IPR009068 | 9.9e-15 | S15/NS1, RNA-binding | |
[43-122] IPR000589 | 6.4e-08 | Ribosomal protein S15 | ||
Orthology group | MCL11805 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS206948-TA
ATGATACCTCCCAGTGCTCTACCTGAAGAATATGCGCTAAGTGAGGAAATTAAAAATGCGTCGGAAGCAGTGAAGCAAATATTTTCTATTGAACATAGAGGGAAAAAAGAATACAACAAGCTCGTGCAAAAGGAGTTGATAAATAGAATAAGAAGACACCAATACGATGAAAACACAGCAGAGACGAGAATTGCAAGAATAACGGGTCACATCCGCTGCTTGCAAGACACATTAGAAAAATATCCAAGAAATGTGAAGGCTAAGCAAACAGCCCAAGAACTTATAGATAGAAGGAAAAAACTGTTGAAATACCTCCGGCAATATGATTACAAAAAATTTGAATGGCTACTAGAGAAACTTAATATTGTTTATAAAGCACATCCAGAGTCCTTACACAAGCTGTCACGTAAGGAGTCGTTACGAAAATTAACTGAAATGCATTGCGAGGACATCCGTCAGGGGAAATTAGCAGAATATAAAAATCTACTGGAGAGTCAACAAGGTCCGTTCCTTAAAGACAAAATTGATGCTTTAAAACTGATAAGAAGCGAGCAGATTGAATTGCAACTACCGATAACTGTAATGGAACAGGATATTAAGAAAGTAGAGCAACAATACGAAGAATGGAAAGTAAAGGACGACCTTAAGCAACAGGCCAGGAAGAAGAAGAAAAACCTTCTATTGGAATAA
>DPOGS206948-PA
MIPPSALPEEYALSEEIKNASEAVKQIFSIEHRGKKEYNKLVQKELINRIRRHQYDENTAETRIARITGHIRCLQDTLEKYPRNVKAKQTAQELIDRRKKLLKYLRQYDYKKFEWLLEKLNIVYKAHPESLHKLSRKESLRKLTEMHCEDIRQGKLAEYKNLLESQQGPFLKDKIDALKLIRSEQIELQLPITVMEQDIKKVEQQYEEWKVKDDLKQQARKKKKNLLLE-