Monarch geneset OGS2.0

DPOGS206976
TranscriptDPOGS206976-TA1857 bp
ProteinDPOGS206976-PA618 aa
Genomic positionDPSCF300001 + 331739-355132
RNAseq coverage34x (Rank: top 74%)
Annotation
HeliconiusHMEL0143661e-15577.55% 
BombyxBGIBMGA012877-TA0.085.84% 
DrosophilaRph-PA5e-7550.00% 
EBI UniRef50UniRef50_D2A6573e-10343.31%Putative uncharacterized protein GLEAN_15653 n=2 Tax=Tribolium castaneum RepID=D2A657_TRICA
NCBI RefSeqXP_973334.18e-10943.35%PREDICTED: similar to Rabphilin CG11556-PA [Tribolium castaneum]
NCBI nr blastpgi|910850052e-10743.35%PREDICTED: similar to Rabphilin CG11556-PA [Tribolium castaneum]
NCBI nr blastxgi|910850052e-11344.75%PREDICTED: similar to Rabphilin CG11556-PA [Tribolium castaneum]
Group
Gene OntologyGO:00055151.1e-38protein binding
GO:00068863.5e-22intracellular protein transport
GO:00082703.5e-22zinc ion binding
GO:00171373.5e-22Rab GTPase binding
GO:00160204.7e-06membrane
GO:00068104.7e-06transport
GO:00080214.7e-06synaptic vesicle
GO:00052154.7e-06transporter activity
KEGG pathway 
InterPro domain[479-617] IPR0089731.1e-38C2 calcium/lipid-binding domain, CaLB
[95-219] IPR0130831.7e-28Zinc finger, RING/FYVE/PHD-type
[93-220] IPR0110111e-24Zinc finger, FYVE/PHD-type
[495-580] IPR0000081.8e-24C2 calcium-dependent membrane targeting
[61-137] IPR0033153.5e-22Rabphilin-3A effector, zinc-binding
[510-522] IPR0204772.4e-09C2 region
[482-497] IPR0015654.7e-06Synaptotagmin
Orthology groupMCL17045 Patchy
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS206976-TA
ATGACGCGTCTTGGTAAACGTGTTCGCAACCGTTGCTGTAATATCGATTTCCAGACGCTAGCAGCCGAGCGTCGAGCAACAGTTGGATGCTATCAACTGGCGGGAACGGAGCGCGTCCTGTCGCCGTCACATAGAATATTATTTATTTTATTTTATTTTATTTTTTTATTTACGATGAACTTACAAAATAAAGCTAATAAGTATGTGTGTCCCAACGATCGACAACTTTCCTTACGCGCAAAACTGCGAACCGGTTGGAGCGCTGCCCGCAGTGAACCCCCGCTGACGGCAACCGAACGGGAAGCTATTGCGGAGGTTGTACGACGAGCTGAGAAAGTCGATGAGGTCGAAGCCCGACGAATCGGCCGACTGGTTGCCCGACTTGAAGGTATGCGTAGATCAGCTCAAGGGCCGGCGCCAAGAAGTTGTCTGCTCTGCGGCGAAACCGCTAAGCTCCTGTCTCCGCTGCGAAGATGCTCCATGTGCCAACATTGGGCCTGCTCTAAATGTGTCATAGAAACACCATCACAGCACAGGCCGTCTATATATTCAAGAGATCCGTACATGTGCAACCTTTGTGCTGAAACAAGAGAGATGTGGAAAAAATCCGGAGCATGGTTCTTTAAGTCATTACCAAAATATGTCCTGCCATCTAAGAAACCAACCGGGCGGTACAACGACTCTGATATTGCTAAAACACTTCAGGAACCAGGTACGAGCAGTAATGATTGTAAGACAGACTCCGATCCTGGTACCCTACACTGTATGCCTCCGCCTTCATTCTCAAGACAACCTAGCAACACTGACAGCAGAAAATCGGTCAGCTCAACACAGGATATCGAATGGAGCGAAACTGACATCCTTAGCCACGGTGTCAGCGGCATCAGTCTCCAACGAGCTGACAGCATCAATCAAAGACCGCTGTGTCTCAAACGCACTAGCAGCAAAGGCAGCGCCTACAGTCTCAGAAACATAAGAAAGGACATGTCTAAACCGATCACGCAAGTCGAAAGACCTCCGACGATTCCCGACGCTGGTTTCGGTACCATAGAAATTAAACTCTCTTATGACAACGGAACCTCTTCATTGGCCGTAACAGTGTTAAGGGCTAGGGGCTTGATCGGTATGGACATGACGGGTCTGTCTGACCCCTTCTGTAGATTGGAAGTATTGCCACGGGAAGGTGCATACTTTAATCGTTTGAGGACAAAAACTGTTCACAAGACAAAGAATCCTGAATACAACGAGACACTACATTTCTTCGGCATCACTGAATCGGATTTATCTATAAAGTCGCTTGAATTGGTTGTGTTCGACGACGATCGATACGGCTGCGATGAAATGGGTTCAGCGACAGTTGCTTTACGCGAATGCCTAAAGACCCCGGCTCAGCTGCGTCTCGCACTCTCCGGGTCCTCAGGCTGCGAGCCGATAGGACCGAGACTCCTGCTAGCATTATGTTACAGTACCAAGAAACGGGCACTGGTGGTCACCGTGTGTAGAGGAACCGACCTCCCACCACAAGATAGCAACGGATACTCAGATCCATTCGTTAAACTACATCTCGACCCGGACCCGTATCACAAAAAACATAAGACGTCTATTAAATGGCGAAACCTAAATCCTGTTTGGAACGAAGAATTTTATTTCGAGACACGTCCGACGGAGCTTTCCCGCCAAAATTTGACTTTGACAGTTTGGGACAAAGACTACGGCAAACCGAATGACTTTCTTGGTAGCTTGGTGCTCGGCGCGAGCAGCAAAGGTAGAAGACTGAAACATTGGATGGACTGCATTAAATTCCCGGATCACCGTCACGAACAATGGCACTCGTTAACTGATATTCAACACTTGTAA

Protein sequence:

>DPOGS206976-PA
MTRLGKRVRNRCCNIDFQTLAAERRATVGCYQLAGTERVLSPSHRILFILFYFIFLFTMNLQNKANKYVCPNDRQLSLRAKLRTGWSAARSEPPLTATEREAIAEVVRRAEKVDEVEARRIGRLVARLEGMRRSAQGPAPRSCLLCGETAKLLSPLRRCSMCQHWACSKCVIETPSQHRPSIYSRDPYMCNLCAETREMWKKSGAWFFKSLPKYVLPSKKPTGRYNDSDIAKTLQEPGTSSNDCKTDSDPGTLHCMPPPSFSRQPSNTDSRKSVSSTQDIEWSETDILSHGVSGISLQRADSINQRPLCLKRTSSKGSAYSLRNIRKDMSKPITQVERPPTIPDAGFGTIEIKLSYDNGTSSLAVTVLRARGLIGMDMTGLSDPFCRLEVLPREGAYFNRLRTKTVHKTKNPEYNETLHFFGITESDLSIKSLELVVFDDDRYGCDEMGSATVALRECLKTPAQLRLALSGSSGCEPIGPRLLLALCYSTKKRALVVTVCRGTDLPPQDSNGYSDPFVKLHLDPDPYHKKHKTSIKWRNLNPVWNEEFYFETRPTELSRQNLTLTVWDKDYGKPNDFLGSLVLGASSKGRRLKHWMDCIKFPDHRHEQWHSLTDIQHL-