| DPOGS207089 | ||
|---|---|---|
| Transcript | DPOGS207089-TA | 294 bp |
| Protein | DPOGS207089-PA | 97 aa |
| Genomic position | DPSCF300001 + 2835507-2835876 | |
| RNAseq coverage | 111x (Rank: top 59%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL004184 | 9e-06 | 30.21% | |
| Bombyx | BGIBMGA013054-TA | 1e-30 | 85.94% | |
| Drosophila | CG33785-PA | 1e-37 | 64.95% | |
| EBI UniRef50 | UniRef50_A1ZBX4 | 3e-35 | 64.95% | DNA-directed RNA polymerase subunit n=14 Tax=Eukaryota RepID=A1ZBX4_DROME |
| NCBI RefSeq | XP_001659197.1 | 2e-37 | 70.10% | DNA-directed RNA polymerases III 12.5 kDa polypeptide, putative [Aedes aegypti] |
| NCBI nr blastp | gi|157118651 | 5e-36 | 70.10% | DNA-directed RNA polymerases III 12.5 kDa polypeptide, putative [Aedes aegypti] |
| NCBI nr blastx | gi|157118651 | 2e-37 | 70.10% | DNA-directed RNA polymerases III 12.5 kDa polypeptide, putative [Aedes aegypti] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0008270 | 1.4e-18 | zinc ion binding | |
| GO:0006351 | 1.4e-18 | transcription, DNA-dependent | ||
| GO:0003676 | 1.4e-18 | nucleic acid binding | ||
| KEGG pathway | aag:AaeL_AAEL001400 | 6e-37 | ||
| K03019 (RPC11) | maps-> | Cytosolic DNA-sensing pathway | ||
| Purine metabolism | ||||
| Pyrimidine metabolism | ||||
| RNA polymerase | ||||
| InterPro domain | [57-96] IPR001222 | 1.4e-18 | Zinc finger, TFIIS-type | |
| Orthology group | MCL17110 | Patchy | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS207089-TA
ATGGTTGAAGAAGCTTTTGAATCATCACTACGGTATGGTTGTAATACTTGCCCCTATATATACAATATACGGAGGAAAGTCTCGTCGCGCACATTCCCAAAATTAAAGGAATTAGATTATATCATGGGTGGTGCTGCTGCATGGGAGAATGTAGATTCAACCGATGCTGTGTGCCCAAAGTGTGCTTATGGTAAAGCATTCTTTATGCAATTACAAACTCGCTCTGCTGATGAGCCCATGACCACATTTTATAGGTGTTGCAATCATAAATGTGCACATAATTGGCGTGATTAA
>DPOGS207089-PA
MVEEAFESSLRYGCNTCPYIYNIRRKVSSRTFPKLKELDYIMGGAAAWENVDSTDAVCPKCAYGKAFFMQLQTRSADEPMTTFYRCCNHKCAHNWRD-