DPOGS207101 | ||
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Transcript | DPOGS207101-TA | 1029 bp |
Protein | DPOGS207101-PA | 342 aa |
Genomic position | DPSCF300001 + 3089654-3092747 | |
RNAseq coverage | 5175x (Rank: top 2%) |
Annotation | ||||
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Heliconius | HMEL013284 | 2e-167 | 84.21% |   |
Bombyx | BGIBMGA013063-TA | 1e-164 | 82.75% |   |
Drosophila | Mdh2-PA | 4e-128 | 70.15% |   |
EBI UniRef50 | UniRef50_P40926 | 2e-116 | 62.17% | Malate dehydrogenase, mitochondrial n=20 Tax=Opisthokonta RepID=MDHM_HUMAN |
NCBI RefSeq | XP_001600547.1 | 2e-132 | 69.10% | PREDICTED: similar to mitochondrial malate dehydrogenase [Nasonia vitripennis] |
NCBI nr blastp | gi|156553655 | 3e-131 | 69.10% | PREDICTED: malate dehydrogenase, mitochondrial-like [Nasonia vitripennis] |
NCBI nr blastx | gi|170044455 | 5e-128 | 71.93% | mitochondrial malate dehydrogenase 2 [Culex quinquefasciatus] |
Group | ||||
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Gene Ontology | GO:0055114 | 2.4e-171 | oxidation-reduction process | |
GO:0006108 | 2.4e-171 | malate metabolic process | ||
GO:0030060 | 2.4e-171 | L-malate dehydrogenase activity | ||
GO:0016616 | 8e-63 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | ||
GO:0003824 | 8e-63 | catalytic activity | ||
GO:0005975 | 8e-63 | carbohydrate metabolic process | ||
GO:0005488 | 4.4e-61 | binding | ||
GO:0044262 | 2.1e-55 | cellular carbohydrate metabolic process | ||
GO:0016491 | 7.4e-46 | oxidoreductase activity | ||
KEGG pathway | nvi:100114033 | 4e-132 |   | |
  | K00026 (MDH2) | maps-> | Citrate cycle (TCA cycle) | |
  |   |   | Pyruvate metabolism | |
  |   |   | Carbon fixation in photosynthetic organisms | |
  |   |   | Glyoxylate and dicarboxylate metabolism | |
InterPro domain | [1-342] IPR010097 | 2.4e-171 | Malate dehydrogenase, type 1 | |
[175-341] IPR015955 | 8e-63 | Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal | ||
[30-174] IPR016040 | 4.4e-61 | NAD(P)-binding domain | ||
[28-342] IPR001557 | 2.1e-55 | L-lactate/malate dehydrogenase | ||
[30-172] IPR001236 | 7.4e-46 | Lactate/malate dehydrogenase, N-terminal | ||
[175-339] IPR022383 | 4.2e-44 | Lactate/malate dehydrogenase, C-terminal | ||
Orthology group | MCL14162 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS207101-TA
ATGTTCTCCCGCACGCTAAAGCCTGCCGCTTCTGTGACTTTTCAGAATGGTTTCAAAAATTTCTCCACTTCATCGCAGAACAACTTCAAAGTCGTGGTTGCTGGGGCGGCTGGAGGAATCGGTCAGCCCTTAGGTCTACTGCTGAAGCAGAATAAGCTAGTCACGAATTTAGCACTATATGACATTGCCCCGGTGACCCCGGGAGTGGCTGCCGACTTGTCCCACATGGATACCCCGGCCAGGGTCAGCGGACATAAAGGACCAGAACAGCTAGCTGATGCTATCAAATGTGCAGATGTAGTGGTAATCCCAGCTGGTGTTCCCCGCAAGCCTGGTATGACTCGTGACGACCTGTTCAACACTAATGCATCCATCGTCCGAGACCTGGCCGCTTGTATTGCAGCGAAAGCTCCAAAGGCTCTCATAGCCATCATCACCAACCCTGTCAATTCCATGGTCCCCATCGCCTCCGAAGTTTTGAAGAAGGCGGGTGTATACGACCCTAATCGTGTGTTTGGTGTGACCACTCTGGATGTAGTCCGTGCCGCGGCCTTCATCGGCGAAATCAACGGTGTGGACCCTGGGTGCGTGTCGATCCCCGTTATTGGAGGTCACTCCGGGGTCACCATCATCCCAGTACTGAGTCAGTGCGAACCTGCCGTCAAATTGTCCGACCAAAGCAAAATAGAAGCTCTCACTAAGAGGATCCAGGAAGCCGGCACTGAGGTGGTGAAGGCCAAGGCTGGTGGTGGATCAGCGACGCTGTCGATGGCATACGCTGGTGCAAGACTCGTATGCTCCCTGCTCAGGGGTCTCAATGGAGAATCAAACGTGATTGAGTGCGCCTATGTCAAATCTGATCTGACTGAGGCCACATATTTCGCGAACCCGCTTTTACTTGGGAAGAACGGCTTGGAGAAGAATCTTGGCTTCGGTAACCTTAACGGTTACGAGCAGGGGCTCCTCAAGGCTGCCATCCCAGAACTACTGAAGAACATCAAGACCGGAGAAGATTTCGCCAAGAAGTAA
>DPOGS207101-PA
MFSRTLKPAASVTFQNGFKNFSTSSQNNFKVVVAGAAGGIGQPLGLLLKQNKLVTNLALYDIAPVTPGVAADLSHMDTPARVSGHKGPEQLADAIKCADVVVIPAGVPRKPGMTRDDLFNTNASIVRDLAACIAAKAPKALIAIITNPVNSMVPIASEVLKKAGVYDPNRVFGVTTLDVVRAAAFIGEINGVDPGCVSIPVIGGHSGVTIIPVLSQCEPAVKLSDQSKIEALTKRIQEAGTEVVKAKAGGGSATLSMAYAGARLVCSLLRGLNGESNVIECAYVKSDLTEATYFANPLLLGKNGLEKNLGFGNLNGYEQGLLKAAIPELLKNIKTGEDFAKK-