Monarch geneset OGS2.0

DPOGS207114
TranscriptDPOGS207114-TA819 bp
ProteinDPOGS207114-PA272 aa
Genomic positionDPSCF300001 + 3295832-3297646
RNAseq coverage34040x (Rank: top 0%)
Annotation
HeliconiusHMEL0132609e-8871.43% 
BombyxBGIBMGA013076-TA6e-10175.46% 
DrosophilaRpL6-PB5e-7157.72% 
EBI UniRef50UniRef50_E0VHR02e-7656.45%60S ribosomal protein L6, putative n=8 Tax=Bilateria RepID=E0VHR0_PEDHC
NCBI RefSeqNP_001037132.13e-10979.12%ribosomal protein L6 [Bombyx mori]
NCBI nr blastpgi|3151153574e-12687.45%ribosomal protein L6 [Euphydryas aurinia]
NCBI nr blastxgi|3151153579e-13687.50%ribosomal protein L6 [Euphydryas aurinia]
Group
Gene OntologyGO:00058401.8e-101ribosome
GO:00064121.8e-101translation
GO:00056221.8e-101intracellular
GO:00037351.8e-101structural constituent of ribosome
KEGG pathwaynvi:1001192629e-83 
 K02934 (RP-L6e, RPL6)maps-> Ribosome
InterPro domain[16-272] IPR0009151.8e-101Ribosomal protein L6E
[118-204] IPR0147222.3e-27Translation protein SH3-like, subgroup
[22-75] IPR0055685.2e-15Ribosomal protein L6, N-terminal
Orthology groupMCL12167 Single-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS207114-TA
ATGGCTCCAGCTCAGCCCAAGGCGGTGGCTAAGGCTCCCGCTGCCCCAGCAGGCGGTGTTCAGAAGGCCAAGGTTGGCAAACCAAGGAACTATGATTTGGGAAATGGAATCATGAGATTCTCCAAGACCAAAATGTTTCACAAGAAGGCCAAGTACAAGTTCATCGGCAAGAAGCACCCTAAAGCTGAGAAGCCCAAGAAACTAGCAGTGGTTGTTAAGCCTATTGGCGGAGACAAGAATGGAGGCACCCGTAGGGTTCTGATCAAGAAGAGGAGGTCATTCTACCCTACCCAGGATAAAATCACCACCCGTTCCCACCACAAGACATTTAGCAAGCACGTGCGTCGCACACGGCCAAATCTTACGCCTGGCACAGTGTGCATTCTGTTGGCTGGTAGACACGCCGGCAAACGCGTTGTACTGCTGTCGGTGATGCCCAGTGGACTCTTGCTTGTCACTGGACCTTTTGCTTTCAACTCCTGCCCGCTTCGCCGCATTCCGCAGCGCTATGTCATCGGAACTAGCACCAAGGTGGACTTAGGTGATTTCAAGCTCCCTGAACACCTTGACGACGCTTACTTCAAGAAGAACAAGAAGAGCGTCAAGCGCAGTGTTAAGCGCAAGCAGGGCGAGGATATCTTCGCCACCAAGAAAGAGAAATATGCTCCATCAGAACAGCGCAAGGTTGACCAGAAGGCGGTTGACGAGGCTGTAATCAAGGCTATCGGTGCACGTGCAGACAAGAAGTTGCTTCGAGGATACCTCAAGTCCTCATTTGGACTGCGTTCCAGCCAGTACCCTCACCGGCTACGGTTCTAG

Protein sequence:

>DPOGS207114-PA
MAPAQPKAVAKAPAAPAGGVQKAKVGKPRNYDLGNGIMRFSKTKMFHKKAKYKFIGKKHPKAEKPKKLAVVVKPIGGDKNGGTRRVLIKKRRSFYPTQDKITTRSHHKTFSKHVRRTRPNLTPGTVCILLAGRHAGKRVVLLSVMPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTKVDLGDFKLPEHLDDAYFKKNKKSVKRSVKRKQGEDIFATKKEKYAPSEQRKVDQKAVDEAVIKAIGARADKKLLRGYLKSSFGLRSSQYPHRLRF-