Monarch geneset OGS2.0

DPOGS207134
TranscriptDPOGS207134-TA750 bp
ProteinDPOGS207134-PA249 aa
Genomic positionDPSCF300001 + 3727732-3730069
RNAseq coverage872x (Rank: top 15%)
Annotation
HeliconiusHMEL0112553e-4561.36% 
BombyxBGIBMGA013096-TA4e-9189.64% 
DrosophilaSF2-PA2e-8382.81% 
EBI UniRef50UniRef50_Q9V3W73e-8182.81%LD40489p n=12 Tax=Drosophila RepID=Q9V3W7_DROME
NCBI RefSeqXP_393525.24e-9077.92%PREDICTED: similar to SF2 CG6987-PA [Apis mellifera]
NCBI nr blastpgi|665482767e-8977.92%PREDICTED: serine/arginine-rich splicing factor 1-like [Apis mellifera]
NCBI nr blastxgi|1565457523e-10478.80%PREDICTED: serine/arginine-rich splicing factor 1-like [Nasonia vitripennis]
Group
Gene OntologyGO:00036761.2e-21nucleic acid binding
GO:00001661.5e-21nucleotide binding
KEGG pathwayame:4100401e-89 
 K12890 (SFRS1_9)maps-> Spliceosome
InterPro domain[13-82] IPR0005041.2e-21RNA recognition motif domain
[8-96] IPR0126771.5e-21Nucleotide-binding, alpha-beta plait
Orthology groupMCL13390 Single-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS207134-TA
ATGTCCGGAGGTAGCGGCGGTAGCAGGAATGAATGTAGAATATACGTTGGTAATCTGCCTCCTGATATTAGGACAAAGGACATCCAAGACCTTTTTTACAAATTTGGTAAAGTCACGTTCGTTGATTTGAAGAACAGAAAAGGACCACCGTTTGCATTCGTCGAATTTGAAGATCCTCGTGATGCAGATGATGCAGTTCGAGCCCGCGATGGCTATGACTACGATGGATATAGGCTACGTGTAGAGTTCCCTCGTGGAGGCGGCGGTGGTGCGCGCGGAGGACGCTCGCAGCCTGATCGCTTTGGGCCGCGTCCAGCAGCACGAGGCCCGCCCGCACGTCGCTCCGAGTATAGAGTGCTCGTCACAGGACTGCCGCCATCGGGCTCCTGGCAGGATCTGAAGGACCATATGCGCGAAGCGGGAGACGTGTGCTTCGCGGACACTTTCAAGGATGGCACTGGTGTGGTGGAATTCCTACGACACGAGGACATGAAGTACGCCGTCAAGAAGCTGGACGACTCGCGCTTTAGAAGCCACGAGGGAGAGGTGTCTTACATCCGGGTTAAGGAAGACTATGGCAGCGGCGGCGGCGGCGGGCTCAGGGACAGATCTCCTGAGTATCAGGCCGGGTCACCTTCGTACACCCGTCGGGGCTCCCCATCATACTCTCCGGTGCGTCGCTCGTACTCGCGCTCACGTTCCCGCTCTCGTTCCCGCTCGCCTGTAACCACCCGCCCACGAAACTACTGA

Protein sequence:

>DPOGS207134-PA
MSGGSGGSRNECRIYVGNLPPDIRTKDIQDLFYKFGKVTFVDLKNRKGPPFAFVEFEDPRDADDAVRARDGYDYDGYRLRVEFPRGGGGGARGGRSQPDRFGPRPAARGPPARRSEYRVLVTGLPPSGSWQDLKDHMREAGDVCFADTFKDGTGVVEFLRHEDMKYAVKKLDDSRFRSHEGEVSYIRVKEDYGSGGGGGLRDRSPEYQAGSPSYTRRGSPSYSPVRRSYSRSRSRSRSRSPVTTRPRNY-