| DPOGS207141 | ||
|---|---|---|
| Transcript | DPOGS207141-TA | 558 bp |
| Protein | DPOGS207141-PA | 185 aa |
| Genomic position | DPSCF300001 + 3877490-3878481 | |
| RNAseq coverage | 55772x (Rank: top 0%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL003595 | 5e-65 | 72.51% | |
| Bombyx | BGIBMGA013108-TA | 3e-57 | 57.38% | |
| Drosophila | % | |||
| EBI UniRef50 | UniRef50_P13276 | 1e-65 | 65.24% | Apolipophorin-3 n=20 Tax=Neoptera RepID=APL3_MANSE |
| NCBI RefSeq | NP_001037078.1 | 1e-55 | 57.38% | apolipophorin III [Bombyx mori] |
| NCBI nr blastp | gi|114058 | 4e-65 | 65.24% | apolipophorin-III [Manduca sexta] |
| NCBI nr blastx | gi|114058 | 1e-64 | 65.24% | apolipophorin-III [Manduca sexta] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0008289 | 3.1e-56 | lipid binding | |
| GO:0006869 | 3.1e-56 | lipid transport | ||
| GO:0005576 | 3.1e-56 | extracellular region | ||
| KEGG pathway | ||||
| InterPro domain | [20-185] IPR013326 | 8.8e-71 | Apolipoprotein/apolipophorin | |
| [32-185] IPR010009 | 3.1e-56 | Apolipophorin-III | ||
| Orthology group | MCL29767 | Lepidoptera specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS207141-TA
ATGGCCAAATTCATCGTAGTAATCTTCGCTTGCTTGGCTTTAGCCTCAGCTGGACTGGTGCGTCGCGATGCTCCCAACATGTTTGATGAGTGGCAAAAGCACGCCCAAGAGTTCCAGAAGATTTTCAACGATCAATTGAACGCTCTCACCAGCTCCAAGAACACCGAGGAGTTCAACAAAGTGTTGAAGGAGGGTTCAGAGTCTGTACTCTCTCAGATTTCTGCTTTGTCAGGCAGCCTTCAATCTGCTCTGAAGGAAGCCAATGGCAAGGCCAAGGAAGCTCTTGAGCAGGCCCAGGCTAACCTGCAACGTACCGCCGAGGATCTGCGCAAATCTCACCCAGAGGTAGAACAGCAAGCCAACGCTCTTAAAGCAAAACTGCAGGACGCCGTTTCCAAGACCGTTTCTGAGACCCAGAAGTTGGTGAAAGAAGTGTCAGCGAACATCGAACAAACCAACCAGAAGCTGACCCCTAAGATCAAGGAGGCCTACGACGACTTCGTGAAACAAGCTGAAGATGTACAGAAGAAGCTGCACGAAGCCGCCAACAAGCAGTAA
>DPOGS207141-PA
MAKFIVVIFACLALASAGLVRRDAPNMFDEWQKHAQEFQKIFNDQLNALTSSKNTEEFNKVLKEGSESVLSQISALSGSLQSALKEANGKAKEALEQAQANLQRTAEDLRKSHPEVEQQANALKAKLQDAVSKTVSETQKLVKEVSANIEQTNQKLTPKIKEAYDDFVKQAEDVQKKLHEAANKQ-