| DPOGS207175 | ||
|---|---|---|
| Transcript | DPOGS207175-TA | 639 bp |
| Protein | DPOGS207175-PA | 212 aa |
| Genomic position | DPSCF300001 + 4890251-4892089 | |
| RNAseq coverage | 58x (Rank: top 69%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL008471 | 8e-54 | 95.10% | |
| Bombyx | BGIBMGA000638-TA | 7e-45 | 74.66% | |
| Drosophila | caup-PA | 9e-42 | 89.47% | |
| EBI UniRef50 | UniRef50_E2AIB6 | 7e-42 | 77.50% | Homeobox protein caupolican n=9 Tax=Formicidae RepID=E2AIB6_CAMFO |
| NCBI RefSeq | XP_002048160.1 | 2e-43 | 87.37% | GJ11493 [Drosophila virilis] |
| NCBI nr blastp | gi|332024321 | 2e-42 | 77.50% | Homeobox protein araucan [Acromyrmex echinatior] |
| NCBI nr blastx | gi|170027820 | 3e-47 | 92.78% | iroquois-class homeodomain protein irx [Culex quinquefasciatus] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0003677 | 1.1e-22 | DNA binding | |
| GO:0006355 | 1.1e-22 | regulation of transcription, DNA-dependent | ||
| GO:0005515 | 6.5e-18 | protein binding | ||
| GO:0005634 | 3.1e-14 | nucleus | ||
| GO:0043565 | 2.5e-11 | sequence-specific DNA binding | ||
| GO:0003700 | 2.5e-11 | sequence-specific DNA binding transcription factor activity | ||
| KEGG pathway | ||||
| InterPro domain | [72-141] IPR012287 | 1.1e-22 | Homeodomain-related | |
| [53-129] IPR009057 | 6.5e-18 | Homeodomain-like | ||
| [87-126] IPR008422 | 3.1e-14 | Homeobox KN domain | ||
| [70-134] IPR001356 | 2.5e-11 | Homeobox | ||
| Orthology group | MCL15530 | Insect specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS207175-TA
ATGGCTTCTCGATCGATCGAGTACTTACGCCCACGTTGTACCCACGCCTGCGCTGCAACGCCCTGCAATGAGGTGCAAGCTCAGACCGACTGGGGACCATTTTTTAACTATTTTCACGCACGAAACCTATTTATTGGGCCCTTCAGACCGCGCCTTTGTCATGTTGCCGGGAAAATCGAAGTCAGATATGGAGCTGGATACGATTTAGCTGCCAGGCGAAAAAACGCTACCAGAGAATCAACAGCTACGCTCAAAGCATGGCTGAACGAGCATAAGAAAAACCCTTACCCCACGAAGGGGGAAAAGATTATGCTGGCGATCATCACCAAGATGACGCTGACACAGGTCTCGACGTGGTTCGCGAACGCAAGACGGCGCCTGAAGAAAGAAAACAAGATGACTTGGGAGCCGAAGAATAAAACGGATGATGACGAAGACACGATGCTCTCCGACGAAGAAAGGGAACAGGACGATAAAATAAAAGCTAACAAAGTGAATTGGCATAACCCGGTTGAGAGCCGGAGGGTGTACGGGCCACCGGGAGGAAGTCGGGGGGAGGAAAGGGAACGCGGGACGGAGGGGGGAAGGGCGTGTGACAGGAGCGGGGAAGGGGGGGCGGTGGTGGTCTCAAGCGTGTAA
>DPOGS207175-PA
MASRSIEYLRPRCTHACAATPCNEVQAQTDWGPFFNYFHARNLFIGPFRPRLCHVAGKIEVRYGAGYDLAARRKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEPKNKTDDDEDTMLSDEEREQDDKIKANKVNWHNPVESRRVYGPPGGSRGEERERGTEGGRACDRSGEGGAVVVSSV-