| DPOGS207203 | ||
|---|---|---|
| Transcript | DPOGS207203-TA | 411 bp |
| Protein | DPOGS207203-PA | 136 aa |
| Genomic position | DPSCF300001 + 5817565-5817975 | |
| RNAseq coverage | 43x (Rank: top 72%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL009332 | 7e-75 | 99.26% | |
| Bombyx | BGIBMGA009648-TA | 6e-75 | 99.26% | |
| Drosophila | His3:CG33866-PA | 6e-75 | 100.00% | |
| EBI UniRef50 | UniRef50_G3H2T7 | 4e-73 | 100.00% | Histone H3 n=7 Tax=Cricetulus griseus RepID=G3H2T7_CRIGR |
| NCBI RefSeq | XP_001608238.1 | 1e-73 | 100.00% | PREDICTED: similar to histone protein Hist2h3c1 [Nasonia vitripennis] |
| NCBI nr blastp | gi|156382552 | 4e-73 | 100.00% | predicted protein [Nematostella vectensis] |
| NCBI nr blastx | gi|354480098 | 4e-69 | 100.00% | PREDICTED: histone H3.2-like [Cricetulus griseus] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0003677 | 1.2e-145 | DNA binding | |
| GO:0006334 | 1.2e-145 | nucleosome assembly | ||
| GO:0000786 | 1.2e-145 | nucleosome | ||
| KEGG pathway | nve:NEMVE_v1g229551 | 5e-74 | ||
| K11253 (H3) | maps-> | Systemic lupus erythematosus | ||
| InterPro domain | [1-136] IPR000164 | 1.2e-145 | Histone H3 | |
| [2-136] IPR009072 | 1.5e-82 | Histone-fold | ||
| [58-132] IPR007125 | 7.7e-33 | Histone core | ||
| Orthology group | MCL10038 | Multiple-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS207203-TA
ATGGCTCGTACTAAACAAACCGCTCGTAAATCAACCGGTGGTAAGGCACCACGTAAACAGCTAGCCACGAAGGCCGCCCGTAAGAGCGCACCGGCAACCGGAGGAGTGAAGAAGCCTCATCGTTACAGACCCGGTACTGTGGCACTTCGTGAGATCCGTCGCTACCAGAAGAGCACGGAACTTCTCATCCGCAAGCTACCCTTCCAACGTCTAGTACGTGAGATAGCTCAAGATTTCAAGACCGATCTGCGTTTCCAGAGCTCTGCGGTGATGGCTCTGCAGGAGGCTAGCGAGGCGTATCTCGTAGGTCTCTTCGAAGACACGAACCTTTGCGCTATTCACGCTAAACGCGTCACTATTATGCCTAAGGACATCCAGCTAGCAAGAAGGATTCGCGGCGAACGTGCCTAA
>DPOGS207203-PA
MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA-