DPOGS207204 | ||
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Transcript | DPOGS207204-TA | 312 bp |
Protein | DPOGS207204-PA | 103 aa |
Genomic position | DPSCF300001 + 5818977-5819288 | |
RNAseq coverage | 1x (Rank: top 94%) |
Annotation | ||||
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Heliconius | HMEL009331 | 4e-54 | 99.03% |   |
Bombyx | BGIBMGA014580-TA | 1e-52 | 100.00% |   |
Drosophila | His4r-PA | 1e-52 | 100.00% |   |
EBI UniRef50 | UniRef50_Q4SKJ3 | 9e-52 | 99.03% | Chromosome undetermined SCAF14565, whole genome shotgun sequence n=2 Tax=Tetraodontidae RepID=Q4SKJ3_TETNG |
NCBI RefSeq | XP_001608236.1 | 4e-51 | 100.00% | PREDICTED: similar to histone H4 [Nasonia vitripennis] |
NCBI nr blastp | gi|344240018 | 3e-51 | 99.03% | Histone H4 [Cricetulus griseus] |
NCBI nr blastx | gi|383853277 | 1e-51 | 100.00% | PREDICTED: LOW QUALITY PROTEIN: histone H2A-like [Megachile rotundata] |
Group | ||||
---|---|---|---|---|
Gene Ontology | GO:0005634 | 6.6e-106 | nucleus | |
GO:0003677 | 6.6e-106 | DNA binding | ||
GO:0006334 | 6.6e-106 | nucleosome assembly | ||
GO:0000786 | 6.6e-106 | nucleosome | ||
KEGG pathway | cqu:CpipJ_CPIJ014768 | 5e-51 |   | |
  | K11254 (H4) | maps-> | Systemic lupus erythematosus | |
InterPro domain | [1-103] IPR001951 | 6.6e-106 | Histone H4 | |
[3-102] IPR009072 | 2.6e-51 | Histone-fold | ||
[28-94] IPR007125 | 1e-14 | Histone core | ||
Orthology group | MCL10013 |   | Multiple-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS207204-TA
ATGACCGGTCGCGGTAAAGGAGGAAAGGGTCTGGGAAAAGGTGGAGCCAAGCGACACAGGAAAGTACTCCGTGATAACATCCAGGGTATCACCAAACCGGCCATACGTCGTCTGGCACGCAGAGGCGGCGTCAAACGTATCTCCGGTCTGATATACGAAGAGACCAGAGGCGTTCTCAAAGTATTCCTAGAGAACGTCATCCGCGACGCCGTCACGTACACCGAGCACGCGAAGAGGAAGACCGTCACAGCCATGGACGTCGTGTACGCCCTGAAGCGACAGGGACGCACCCTATACGGTTTCGGCGGTTAA
>DPOGS207204-PA
MTGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG-