| DPOGS207237 | ||
|---|---|---|
| Transcript | DPOGS207237-TA | 300 bp |
| Protein | DPOGS207237-PA | 99 aa |
| Genomic position | DPSCF300235 + 330585-330884 | |
| RNAseq coverage | 28x (Rank: top 76%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL004215 | 4e-26 | 53.26% | |
| Bombyx | BGIBMGA013954-TA | 3e-21 | 41.94% | |
| Drosophila | plexA-PA | 3e-14 | 37.04% | |
| EBI UniRef50 | UniRef50_O96681 | 8e-12 | 37.04% | Plexin A n=61 Tax=Coelomata RepID=O96681_DROME |
| NCBI RefSeq | XP_001945163.1 | 7e-18 | 40.45% | PREDICTED: similar to plexin A CG11081-PA [Acyrthosiphon pisum] |
| NCBI nr blastp | gi|328708878 | 2e-16 | 40.45% | PREDICTED: plexin-A4-like [Acyrthosiphon pisum] |
| NCBI nr blastx | gi|328708878 | 2e-16 | 40.45% | PREDICTED: plexin-A4-like [Acyrthosiphon pisum] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0016020 | 1.4e-07 | membrane | |
| GO:0007275 | 1.4e-07 | multicellular organismal development | ||
| GO:0004872 | 1.4e-07 | receptor activity | ||
| KEGG pathway | api:100166976 | 2e-17 | ||
| K06820 (PLXNA) | maps-> | Axon guidance | ||
| InterPro domain | [38-88] IPR016201 | 1.4e-07 | Plexin-like fold | |
| [42-84] IPR002165 | 6.5e-07 | Plexin | ||
| Orthology group | MCL22346 | Lepidoptera specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS207237-TA
ATGATTTACTGTTATCCTATTATGTTTAAATATAAACCTCATAAAGGGGCAGTCCATGGAACCTTACAGATTATCTGGGGAGGGATGGAACCATTTTCGAATGTTATTCCAATAACTATATACAGATGTGAAAACTTAGCGAATGACTGTAATTCTTGTATTTCCATACCAAAGGCCTATGCATGTGGCTGGTGTCCCAACACAAACGTTTGCGTTATTGGAGAAGAATGCAGCGAAGACATAATACGCTGGTCTTTAAATCGTCTAAACTGTAATGACAAAAAATTACGTTATACTTAG
>DPOGS207237-PA
MIYCYPIMFKYKPHKGAVHGTLQIIWGGMEPFSNVIPITIYRCENLANDCNSCISIPKAYACGWCPNTNVCVIGEECSEDIIRWSLNRLNCNDKKLRYT-