| DPOGS207256 | ||
|---|---|---|
| Transcript | DPOGS207256-TA | 423 bp |
| Protein | DPOGS207256-PA | 140 aa |
| Genomic position | DPSCF300008 - 781235-784408 | |
| RNAseq coverage | 1615x (Rank: top 8%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL007972 | 6e-55 | 90.71% | |
| Bombyx | BGIBMGA012124-TA | 8e-55 | 84.13% | |
| Drosophila | emc-PA | 3e-33 | 69.15% | |
| EBI UniRef50 | UniRef50_Q5TX46 | 7e-33 | 72.53% | AGAP007696-PA n=4 Tax=Endopterygota RepID=Q5TX46_ANOGA |
| NCBI RefSeq | NP_001040299.1 | 3e-59 | 81.25% | extramacrochaetae protein [Bombyx mori] |
| NCBI nr blastp | gi|114051467 | 9e-58 | 81.25% | extramacrochaetae protein [Bombyx mori] |
| NCBI nr blastx | gi|114051467 | 2e-57 | 81.25% | extramacrochaetae protein [Bombyx mori] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005634 | 3.9e-07 | nucleus | |
| GO:0006355 | 3.9e-07 | regulation of transcription, DNA-dependent | ||
| KEGG pathway | cqu:CpipJ_CPIJ007015 | 6e-44 | ||
| K04680 (ID) | maps-> | TGF-beta signaling pathway | ||
| InterPro domain | [32-102] IPR011598 | 3.9e-07 | Helix-loop-helix DNA-binding | |
| [33-70] IPR001092 | 1e-06 | Helix-loop-helix DNA-binding domain | ||
| Orthology group | MCL17416 | Insect specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS207256-TA
ATGAAAGCCATAACGGCGATGTGTGCGACCGGAGCCTCCGTACCGGCGATCGCCAGCGGACGTGTTCAGAGACACCGAGACGGCGAAAACGCTGAGATACAGATGTATCTCTCGAAATTACAAGACCTCGTGCCTTTCATGCCAAAAAATAGGCGCATCTCTAAGTTAGAAGTCATCCAGCATGTCATTGACTACATCTGTGACCTGCAATCAGCTCTGGAAAATCATCCAGCGGTTGGACAGTTCGAAGCCGAGGCAGCTCTAGCGCCGACTTGTACTTCTCCGCCAAAACCGCGTCGCAGGCCTCTCGGACCTCGCCCAGCTCCCAATACAATCCTCCCGACTGACAAAGCTGTACCTTCACATCATTCAAATCACACGACGCCGGAGAAACAGGACCAACCGGACAGGTCGACGTGCTAA
>DPOGS207256-PA
MKAITAMCATGASVPAIASGRVQRHRDGENAEIQMYLSKLQDLVPFMPKNRRISKLEVIQHVIDYICDLQSALENHPAVGQFEAEAALAPTCTSPPKPRRRPLGPRPAPNTILPTDKAVPSHHSNHTTPEKQDQPDRSTC-