| DPOGS207271 | ||
|---|---|---|
| Transcript | DPOGS207271-TA | 891 bp |
| Protein | DPOGS207271-PA | 296 aa |
| Genomic position | DPSCF300008 - 251278-255639 | |
| RNAseq coverage | 446x (Rank: top 27%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL017400 | 5e-99 | 76.74% | |
| Bombyx | BGIBMGA012134-TA | 3e-148 | 84.45% | |
| Drosophila | CG2681-PA | 2e-35 | 30.56% | |
| EBI UniRef50 | UniRef50_B0X888 | 2e-45 | 36.79% | Seven in absentia n=3 Tax=Culicinae RepID=B0X888_CULQU |
| NCBI RefSeq | XP_001651488.1 | 9e-50 | 37.29% | hypothetical protein AaeL_AAEL005826 [Aedes aegypti] |
| NCBI nr blastp | gi|157111329 | 2e-48 | 37.29% | hypothetical protein AaeL_AAEL005826 [Aedes aegypti] |
| NCBI nr blastx | gi|157111329 | 7e-49 | 37.29% | hypothetical protein AaeL_AAEL005826 [Aedes aegypti] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005634 | 1.7e-34 | nucleus | |
| GO:0006511 | 1.7e-34 | ubiquitin-dependent protein catabolic process | ||
| GO:0007275 | 1.7e-34 | multicellular organismal development | ||
| GO:0005515 | 3.1e-10 | protein binding | ||
| GO:0016567 | 2.1e-06 | protein ubiquitination | ||
| GO:0008270 | 2.1e-06 | zinc ion binding | ||
| GO:0004842 | 2.1e-06 | ubiquitin-protein ligase activity | ||
| KEGG pathway | tca:100142282 | 1e-18 | ||
| K04506 (SIAH1) | maps-> | Ubiquitin mediated proteolysis | ||
| Wnt signaling pathway | ||||
| p53 signaling pathway | ||||
| InterPro domain | [18-271] IPR004162 | 1.7e-34 | Seven-in-absentia protein, sina | |
| [73-265] IPR018121 | 2.4e-29 | Seven-in-absentia protein, TRAF-like domain | ||
| [84-270] IPR008974 | 3.1e-10 | TRAF-like | ||
| [88-139] IPR013323 | 2.1e-06 | Seven In Absentia Homolog-type | ||
| Orthology group | MCL18135 | Insect specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS207271-TA
ATGTCGTCAGCGTCGTCGACTACAGGAAGAAAGATGGTGTTAAGTACGCTACTAGAGACTGATCACTATGAGAGCATAATCAAAGAGCTGACTTGTACCAAATGTAAACAGTACATGAAACCTCCAATATACCTTTGCGTCGATGGCCATAGTATATGCTGTAAATGCTATGAAAAGAGTTATCAATGCCATATTTGTCTGAAAGAATTTGCTCTCATCCGTCCAGTCGTACTGGAATCTCTAGCCAATAAAGTGTTATTCCCTTGCACTAATGGGGGATGCCCAAAACATGCAACACTTCCAGTATTGGAAAAGCACACACCTCACTGCCAATTCCGCATAATTAACTGTTTCATGGCTAGAGTCTATGGTAATTGTGCATGGGAGGGTCGGGCCGGCGAATGGATGGACCATTGCTTTTTGGAGCACAAACAAAAGGTGACCGAGTTGCCTTTTATCACTATTAAAGATAAATGGGATGCTAAACGGACAGAGCCTGTTCTCAACTATTTTTTACTGAAATGCTTTGAAAAGATTTTTAACGTCTACCAGATATACGACAAAAGAGGTGGTAGAATGATGTGGACTGTTCTTGTGAATGATGAACATGCTGATAAATTTTATTTTGAAGTGGATATTTTTTTACCAAATCTTCCTTGCAAAAGGATTGTTTATAGACGGCCTTGTAAGTGCGAAAAAGATGCTGATTTTCTCGAGCACACTCAGAACGTCTACATTCCCGTTGAGAACGTGTTTTCAATGCTGGACGAGGATGAATCACTGAATTTCACTGTTAGAATTGGCGAGGTTGAAAACTTGCCCCTACTAGAAACGCCCACGGCGAGCGAAAGCTTGATACTACTGAACAACGATGAACATAAAGAGGATTAA
>DPOGS207271-PA
MSSASSTTGRKMVLSTLLETDHYESIIKELTCTKCKQYMKPPIYLCVDGHSICCKCYEKSYQCHICLKEFALIRPVVLESLANKVLFPCTNGGCPKHATLPVLEKHTPHCQFRIINCFMARVYGNCAWEGRAGEWMDHCFLEHKQKVTELPFITIKDKWDAKRTEPVLNYFLLKCFEKIFNVYQIYDKRGGRMMWTVLVNDEHADKFYFEVDIFLPNLPCKRIVYRRPCKCEKDADFLEHTQNVYIPVENVFSMLDEDESLNFTVRIGEVENLPLLETPTASESLILLNNDEHKED-