| DPOGS207272 | ||
|---|---|---|
| Transcript | DPOGS207272-TA | 555 bp |
| Protein | DPOGS207272-PA | 184 aa |
| Genomic position | DPSCF300008 - 69878-70432 | |
| RNAseq coverage | 492x (Rank: top 25%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL012321 | 3e-105 | 98.37% | |
| Bombyx | BGIBMGA012136-TA | 1e-102 | 96.20% | |
| Drosophila | CG2219-PA | 4e-64 | 83.58% | |
| EBI UniRef50 | UniRef50_B4H857 | 5e-63 | 84.09% | GL18160 n=9 Tax=Endopterygota RepID=B4H857_DROPE |
| NCBI RefSeq | XP_970752.1 | 4e-87 | 83.15% | PREDICTED: similar to GA15309-PA [Tribolium castaneum] |
| NCBI nr blastp | gi|91092066 | 6e-86 | 83.15% | PREDICTED: similar to GA15309-PA [Tribolium castaneum] |
| NCBI nr blastx | gi|91092066 | 7e-84 | 83.15% | PREDICTED: similar to GA15309-PA [Tribolium castaneum] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005525 | 4.9e-108 | GTP binding | |
| GO:0007264 | 2e-46 | small GTPase mediated signal transduction | ||
| GO:0005622 | 2e-46 | intracellular | ||
| GO:0006886 | 2.7e-10 | intracellular protein transport | ||
| KEGG pathway | ||||
| InterPro domain | [1-182] IPR006689 | 4.9e-108 | Small GTPase superfamily, ARF/SAR type | |
| [1-173] IPR024156 | 2e-46 | Small GTPase superfamily, ARF type | ||
| [1-120] IPR005225 | 1.8e-18 | Small GTP-binding protein domain | ||
| [1-169] IPR006687 | 2.7e-10 | Small GTPase superfamily, SAR1-type | ||
| Orthology group | MCL15202 | Patchy | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS207272-TA
ATGCTAGGACTGGACTCGGCGGGTAAAACTACTGCACTATACAGACTGAAGTTTGACCAGTATCTCAACACCGTCCCCACGATAGGCTTTAACTGCGAAAAAGTGAAAGGCACAATCGGTAAATCTAAAGGTGTTAATTTTCTCGTTTGGGATGTCGGCGGACAAGAAAAACTCCGGCCTCTATGGAAATCATACACACGATGCACGGATGGCATAATATTTGTTCTCGATTCTGTTGACGTCGAGAGAATGGAAGAGGCTAAAATGGAGTTAATACGTACAGCAAAGTCACCAGATAACACAGGGGTGCCTATATTGGTGCTGGCAAATAAACAAGATTTGCCTGGTGCAAAGGAACCAAGAGAACTAGAAAAGCTATTGGGATTGCATGAACTGGTATCTTCTCCGCATGGATCCCGAGATGCGCACTCATGGCACGTGCAACCAGCCTGCGCTATTACTGGAGAAGGACTGCATGAAGGCCTCGAAGCTCTTCATGAAATGATATTGAAGAGAAGAAAATTGGCGAAGTTGCAAAAGAAGAGAGTGAGATAA
>DPOGS207272-PA
MLGLDSAGKTTALYRLKFDQYLNTVPTIGFNCEKVKGTIGKSKGVNFLVWDVGGQEKLRPLWKSYTRCTDGIIFVLDSVDVERMEEAKMELIRTAKSPDNTGVPILVLANKQDLPGAKEPRELEKLLGLHELVSSPHGSRDAHSWHVQPACAITGEGLHEGLEALHEMILKRRKLAKLQKKRVR-