Monarch geneset OGS2.0

DPOGS207303
TranscriptDPOGS207303-TA645 bp
ProteinDPOGS207303-PA214 aa
Genomic positionDPSCF300008 + 870898-877463
RNAseq coverage41x (Rank: top 72%)
Annotation
HeliconiusHMEL0073641e-5055.92% 
BombyxBGIBMGA012033-TA1e-7166.82% 
DrosophilaHLH54F-PA2e-1667.74% 
EBI UniRef50UniRef50_B3A0262e-6966.82%Basic helix-loop-helix type transcription factor HLH54F n=1 Tax=Bombyx mori RepID=B3A026_BOMMO
NCBI RefSeqNP_001124342.13e-7066.82%basic helix-loop-helix type transcription factor HLH54F [Bombyx mori]
NCBI nr blastpgi|1959633396e-6966.82%basic helix-loop-helix type transcription factor HLH54F [Bombyx mori]
NCBI nr blastxgi|1959633398e-7666.82%basic helix-loop-helix type transcription factor HLH54F [Bombyx mori]
Group
Gene OntologyGO:00056349e-18nucleus
GO:00063559e-18regulation of transcription, DNA-dependent
KEGG pathway 
InterPro domain[35-97] IPR0115989e-18Helix-loop-helix DNA-binding
[42-93] IPR0010921.6e-15Helix-loop-helix DNA-binding domain
Orthology groupMCL17867 Insect specific
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS207303-TA
ATGCCTAGGAAACGATTAAATCGATCGAATATCGATAAAAGAGTAGAAGACGGAGATGATGATGCCTTCCTATTTGAAGATTCTCTGTCCAGTTCCGGTAGAAGCGGTCACGAGCCCCAACATAGGAATGCCGCGAATGCGCGGGAAAGAGCCCGTATGAGAGTATTGTCGAAGGCTTTTTGCAGGCTAAAGACCACCTTACCCTGGGTACCAGCTGACACTAAGCTCTCCAAGCTGGACACCCTTCGTTTGGCTGCATCTTACATCGCACACCTTCGCGCTCTGCTGCATGAGCCGCGATCCGCACACACACCGCCGCATCCGCTCAATCTCGCATGGCCATTTGCATTCCAACATGGTGGCAGTTTAAGTTGTACGATCTCTCAAAGATGGAGTGTTAACACACAAAACTGCGACTCAACTGCCGAGGAAAGAAACCAGATCCAAAGAGAAATACATAATAGCGGAAGATGCAACGAAAATTATAACCAAGATTATTCTGAAAATGACTACGAAGACAGAAATTACGAAGAAATGACGAACGATGTCCCTTGCAATAACGTGCAATATTGTGATTACGGTTACAAAGAGAACTATTATGAGATGAGGAACTCTTATTCGTCAAACGGATTAATGAATGTGTGA

Protein sequence:

>DPOGS207303-PA
MPRKRLNRSNIDKRVEDGDDDAFLFEDSLSSSGRSGHEPQHRNAANARERARMRVLSKAFCRLKTTLPWVPADTKLSKLDTLRLAASYIAHLRALLHEPRSAHTPPHPLNLAWPFAFQHGGSLSCTISQRWSVNTQNCDSTAEERNQIQREIHNSGRCNENYNQDYSENDYEDRNYEEMTNDVPCNNVQYCDYGYKENYYEMRNSYSSNGLMNV-