DPOGS207303 | ||
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Transcript | DPOGS207303-TA | 645 bp |
Protein | DPOGS207303-PA | 214 aa |
Genomic position | DPSCF300008 + 870898-877463 | |
RNAseq coverage | 41x (Rank: top 72%) |
Annotation | ||||
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Heliconius | HMEL007364 | 1e-50 | 55.92% |   |
Bombyx | BGIBMGA012033-TA | 1e-71 | 66.82% |   |
Drosophila | HLH54F-PA | 2e-16 | 67.74% |   |
EBI UniRef50 | UniRef50_B3A026 | 2e-69 | 66.82% | Basic helix-loop-helix type transcription factor HLH54F n=1 Tax=Bombyx mori RepID=B3A026_BOMMO |
NCBI RefSeq | NP_001124342.1 | 3e-70 | 66.82% | basic helix-loop-helix type transcription factor HLH54F [Bombyx mori] |
NCBI nr blastp | gi|195963339 | 6e-69 | 66.82% | basic helix-loop-helix type transcription factor HLH54F [Bombyx mori] |
NCBI nr blastx | gi|195963339 | 8e-76 | 66.82% | basic helix-loop-helix type transcription factor HLH54F [Bombyx mori] |
Group | ||||
---|---|---|---|---|
Gene Ontology | GO:0005634 | 9e-18 | nucleus | |
GO:0006355 | 9e-18 | regulation of transcription, DNA-dependent | ||
KEGG pathway |   | |||
InterPro domain | [35-97] IPR011598 | 9e-18 | Helix-loop-helix DNA-binding | |
[42-93] IPR001092 | 1.6e-15 | Helix-loop-helix DNA-binding domain | ||
Orthology group | MCL17867 |   | Insect specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS207303-TA
ATGCCTAGGAAACGATTAAATCGATCGAATATCGATAAAAGAGTAGAAGACGGAGATGATGATGCCTTCCTATTTGAAGATTCTCTGTCCAGTTCCGGTAGAAGCGGTCACGAGCCCCAACATAGGAATGCCGCGAATGCGCGGGAAAGAGCCCGTATGAGAGTATTGTCGAAGGCTTTTTGCAGGCTAAAGACCACCTTACCCTGGGTACCAGCTGACACTAAGCTCTCCAAGCTGGACACCCTTCGTTTGGCTGCATCTTACATCGCACACCTTCGCGCTCTGCTGCATGAGCCGCGATCCGCACACACACCGCCGCATCCGCTCAATCTCGCATGGCCATTTGCATTCCAACATGGTGGCAGTTTAAGTTGTACGATCTCTCAAAGATGGAGTGTTAACACACAAAACTGCGACTCAACTGCCGAGGAAAGAAACCAGATCCAAAGAGAAATACATAATAGCGGAAGATGCAACGAAAATTATAACCAAGATTATTCTGAAAATGACTACGAAGACAGAAATTACGAAGAAATGACGAACGATGTCCCTTGCAATAACGTGCAATATTGTGATTACGGTTACAAAGAGAACTATTATGAGATGAGGAACTCTTATTCGTCAAACGGATTAATGAATGTGTGA
>DPOGS207303-PA
MPRKRLNRSNIDKRVEDGDDDAFLFEDSLSSSGRSGHEPQHRNAANARERARMRVLSKAFCRLKTTLPWVPADTKLSKLDTLRLAASYIAHLRALLHEPRSAHTPPHPLNLAWPFAFQHGGSLSCTISQRWSVNTQNCDSTAEERNQIQREIHNSGRCNENYNQDYSENDYEDRNYEEMTNDVPCNNVQYCDYGYKENYYEMRNSYSSNGLMNV-