| DPOGS207381 | ||
|---|---|---|
| Transcript | DPOGS207381-TA | 354 bp |
| Protein | DPOGS207381-PA | 117 aa |
| Genomic position | DPSCF300267 + 31523-31985 | |
| RNAseq coverage | 206x (Rank: top 46%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL012237 | 7e-48 | 71.79% | |
| Bombyx | BGIBMGA008878-TA | 2e-44 | 67.83% | |
| Drosophila | CG17996-PA | 8e-34 | 61.76% | |
| EBI UniRef50 | UniRef50_D6WVU5 | 3e-34 | 58.49% | Putative uncharacterized protein n=4 Tax=Tribolium castaneum RepID=D6WVU5_TRICA |
| NCBI RefSeq | NP_001140193.1 | 4e-42 | 66.96% | Cmc1 protein [Bombyx mori] |
| NCBI nr blastp | gi|226502030 | 9e-41 | 66.96% | Cmc1 protein [Bombyx mori] |
| NCBI nr blastx | gi|226502030 | 2e-41 | 67.54% | Cmc1 protein [Bombyx mori] |
| Group | ||||
|---|---|---|---|---|
| KEGG pathway | ||||
| InterPro domain | [35-104] IPR013892 | 3.2e-17 | Cytochrome c oxidase biogenesis protein Cmc1-like | |
| Orthology group | MCL13840 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS207381-TA
ATGCCGGAAGCGACAGTCCTACCAAAAAAATTTTCAGATGGACCTCATGGACTTGGAGATCCTGAGGACAGATCGTTGAGAAAAGTTGAAGTCGAAGTAGTTATTCCAAAACTAATGAGGGAAAAGGCTAAAACTGAAAAATGCATCAAGGAGGTTGAAGATTTTAATAAATGCTGTAAAGCCTCGTCTCTTTTTATGGTTTTTAAATGTAGAGATGAAAACTCAGCGCTAAAATCTTGCATGGCTAAATGGTATAATGATGAGAAATTTAAAAATGTATGCACTGAGGAATATCTACAGCAAAGAAGTGAATATAGAAAAACAGGTATAAAGAAATCAATAAGAAGAGTTTGA
>DPOGS207381-PA
MPEATVLPKKFSDGPHGLGDPEDRSLRKVEVEVVIPKLMREKAKTEKCIKEVEDFNKCCKASSLFMVFKCRDENSALKSCMAKWYNDEKFKNVCTEEYLQQRSEYRKTGIKKSIRRV-