DPOGS207424 | ||
---|---|---|
Transcript | DPOGS207424-TA | 888 bp |
Protein | DPOGS207424-PA | 295 aa |
Genomic position | DPSCF300087 + 337597-348024 | |
RNAseq coverage | 1264x (Rank: top 10%) |
Annotation | ||||
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Heliconius | HMEL002077 | 2e-83 | 89.66% |   |
Bombyx | BGIBMGA009323-TA | 9e-96 | 78.48% |   |
Drosophila | CG4747-PB | 2e-41 | 33.92% |   |
EBI UniRef50 | UniRef50_E2A676 | 1e-66 | 53.82% | Nuclear protein NP60-like protein n=3 Tax=Formicidae RepID=E2A676_CAMFO |
NCBI RefSeq | XP_623061.1 | 7e-66 | 52.38% | PREDICTED: similar to CG4747-PA, partial [Apis mellifera] |
NCBI nr blastp | gi|307184734 | 5e-66 | 53.82% | Nuclear protein NP60-like protein [Camponotus floridanus] |
NCBI nr blastx | gi|307184734 | 3e-66 | 52.00% | Nuclear protein NP60-like protein [Camponotus floridanus] |
Group | ||||
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Gene Ontology | GO:0055114 | 3e-61 | oxidation-reduction process | |
GO:0016491 | 3e-61 | oxidoreductase activity | ||
GO:0005488 | 3.7e-10 | binding | ||
GO:0006098 | 4e-09 | pentose-phosphate shunt | ||
GO:0004616 | 4e-09 | phosphogluconate dehydrogenase (decarboxylating) activity | ||
KEGG pathway | aag:AaeL_AAEL006684 | 7e-57 |   | |
  | K00020 (E1.1.1.31, mmsB) | maps-> | Valine, leucine and isoleucine degradation | |
InterPro domain | [11-271] IPR015815 | 3e-61 | 3-hydroxyacid dehydrogenase/reductase | |
[5-73] IPR000313 | 9.5e-18 | PWWP | ||
[232-269] IPR016040 | 3.7e-10 | NAD(P)-binding domain | ||
[234-268] IPR006115 | 4e-09 | 6-phosphogluconate dehydrogenase, NADP-binding | ||
Orthology group | MCL18349 |   | Insect specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS207424-TA
ATGTCTGTTGCTTATAAACTTGGTGATTTAGTTTGGGCCAAAATGAAGGGGTTCAGCCCTTGGCCCGGCCGTGTGGCCATTCCTACTCCAGAACTAAAGCCTCCAAAGAAAGCTATGAATGTACAATGCATATACTTCTTTGGTACAAATAACTACGCGTGGATCGAGGAGCACAACATAAAGCCCTACCAGGAGCACAAAGAACAGTTGATAAAGTCGTGTAAAACGACCGCCTTCAAGGAGGCCGTGGCGCAGATTGAAGAGTACATCGAGAACCCTGAGAAATGGGGGGATTTCGAAGAGCACGTCCGTAACCCCGAAGAGGAGTTTGACAAACTAAAAGATGTCATGAAAGAAGAGAGCTCCGATGAGAAACAACAGGAAGAGGAACCCTCGCCCGAGGTGAAGAAGAAGAGCTCCACACCAAAGATACGTTATGGATTTTCAAAGGTGAAGCCAGTGAAGCGGTCGTCGTCGGCCGGCCTGAAGCCCACCCCCCGCAAGAAGGCGAAGAGCGTCTCCCGCTCCTTCACGGACACGGACATCGCCAACGAGAAGCCCTCCATGCTGAACCACTCCTTCTCCAAGAAGTCCAGCCTGCTGCACCGCCCCTCCAATATATTGAGACCCGACACGCCGCCGTTAGACCTGGAGAACGTGTCGGAAACCCTGCTGGAGAAGAACATCAAGGCCAGTCAGATGAAGTTCGGTTTCCTCGGCCTGGGGATCATGGGCAGCGGCATCGTTAAGAACCTGCTGAACTCCGGACACAAGGTGCTGGTGTGGAACAGGACGGCGGCCAAGGGGCGGCTCCCGGCTGAGAGCACACCACCGCTCATGATGGCTGGTCGTGGTTTGAAATTCAACCTTATACAACCTTTACTATAG
>DPOGS207424-PA
MSVAYKLGDLVWAKMKGFSPWPGRVAIPTPELKPPKKAMNVQCIYFFGTNNYAWIEEHNIKPYQEHKEQLIKSCKTTAFKEAVAQIEEYIENPEKWGDFEEHVRNPEEEFDKLKDVMKEESSDEKQQEEEPSPEVKKKSSTPKIRYGFSKVKPVKRSSSAGLKPTPRKKAKSVSRSFTDTDIANEKPSMLNHSFSKKSSLLHRPSNILRPDTPPLDLENVSETLLEKNIKASQMKFGFLGLGIMGSGIVKNLLNSGHKVLVWNRTAAKGRLPAESTPPLMMAGRGLKFNLIQPLL-