DPOGS207449 | ||
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Transcript | DPOGS207449-TA | 651 bp |
Protein | DPOGS207449-PA | 216 aa |
Genomic position | DPSCF300051 - 383274-385014 | |
RNAseq coverage | 219x (Rank: top 45%) |
Annotation | ||||
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Heliconius | HMEL014851 | 2e-72 | 63.59% |   |
Bombyx | BGIBMGA001192-TA | 3e-47 | 59.12% |   |
Drosophila | CG13163-PA | 1e-22 | 39.10% |   |
EBI UniRef50 | UniRef50_Q170L7 | 3e-40 | 52.17% | Translation initiation factor-3 (IF3), putative n=3 Tax=Culicidae RepID=Q170L7_AEDAE |
NCBI RefSeq | XP_001652952.1 | 6e-41 | 52.17% | translation initiation factor-3 (IF3), putative [Aedes aegypti] |
NCBI nr blastp | gi|157117136 | 1e-39 | 52.17% | translation initiation factor-3 (IF3), putative [Aedes aegypti] |
NCBI nr blastx | gi|157117136 | 3e-40 | 51.19% | translation initiation factor-3 (IF3), putative [Aedes aegypti] |
Group | ||||
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Gene Ontology | GO:0006413 | 2.3e-08 | translational initiation | |
GO:0003743 | 2.3e-08 | translation initiation factor activity | ||
KEGG pathway |   | |||
InterPro domain | [113-194] IPR019815 | 2.3e-08 | Translation initiation factor 3, C-terminal | |
Orthology group | MCL16877 |   | Insect specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS207449-TA
ATGAACAAATTGCGTAATTTATTAAGTGCTAGACGCGTATTGGAATGCCGATCAATCGCAACCAGGATCACTGCTGATGGCAAAGATATACCAAAGAAAAAGGTTTTTGAAAACAGAATAACCTTGATTGGTAGCGACAATTCTATAACGATTACCGACCTTAAAAGTGCTCAAAGTTTATCAACTAGGCGTGAATTAAAACTAGTAAAAATCCAGGATGAAGATTCTAAAACGAGAAGGCCTGTTTACAAACTGATGACAAACTCAGAGTACCATGAAGAAGAATTATCTGCTAGAATTGAAAAGAAGGCAGCTAAGGAAAATAAACTAATCAAGGGAAATAAGTTAATAACACTTTCGTCGCGAATAGCCGAGCATGATGTGATGACAAACTTAAAGAAGATGATGAAGCTCTTGGAAAAGAACTATGAAGTCAGGGTTGTTGTGTCTGGTGACGAGAGTCAGCCGGATAAAGCTGAAAGAATATACTCGATTATTGAGAAGAATTTAAAATCGATTGGGAATATTGTACAAAAGAGGAACAAAGGTAATAACTTAAGATTCCAAGTTCTTCCACTAAGGGACAACAGCAATCAATCAAAGAATGACTCTAACTCGGGTGAAAGCAATGACCAAAAAGGTCCGCTATGA
>DPOGS207449-PA
MNKLRNLLSARRVLECRSIATRITADGKDIPKKKVFENRITLIGSDNSITITDLKSAQSLSTRRELKLVKIQDEDSKTRRPVYKLMTNSEYHEEELSARIEKKAAKENKLIKGNKLITLSSRIAEHDVMTNLKKMMKLLEKNYEVRVVVSGDESQPDKAERIYSIIEKNLKSIGNIVQKRNKGNNLRFQVLPLRDNSNQSKNDSNSGESNDQKGPL-