| DPOGS207462 | ||
|---|---|---|
| Transcript | DPOGS207462-TA | 543 bp |
| Protein | DPOGS207462-PA | 180 aa |
| Genomic position | DPSCF300051 - 144776-146648 | |
| RNAseq coverage | 494x (Rank: top 25%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL005246 | 2e-65 | 73.45% | |
| Bombyx | BGIBMGA001204-TA | 4e-94 | 91.76% | |
| Drosophila | Bx-PB | 6e-58 | 72.79% | |
| EBI UniRef50 | UniRef50_B0W573 | 8e-62 | 88.80% | Rhombotin n=2 Tax=Culicidae RepID=B0W573_CULQU |
| NCBI RefSeq | XP_001945042.1 | 5e-66 | 86.47% | PREDICTED: similar to rhombotin [Acyrthosiphon pisum] |
| NCBI nr blastp | gi|158289946 | 2e-64 | 87.22% | AGAP010391-PA [Anopheles gambiae str. PEST] |
| NCBI nr blastx | gi|242005244 | 2e-66 | 86.57% | LIM-only protein, putative [Pediculus humanus corporis] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0008270 | 3.8e-13 | zinc ion binding | |
| KEGG pathway | ||||
| InterPro domain | [49-105] IPR001781 | 3.8e-13 | Zinc finger, LIM-type | |
| Orthology group | MCL26656 | Lepidoptera specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS207462-TA
ATGGAACGCTTCTGGCACGAGGACTGCCTCAAGTGCGGCTGCTGTGACTGCCGCTTAGGAGAGGTCGGCTCCAAACTCTACTATAAAGCCGACCTCATGCTCTGTAAGAGAGACTATCTTAGGTTATTCGGCGCTACCGGCAATTGCGTGGCGTGCAACAAAGTCATTCCAGCATTCGAAATGGTCATGCGTGCGAAGAGTTTTGTTTACCACTTAGAATGCTTCGCCTGTCAACAGTGCAACCACAGGTTTTGTGTGGGCGATAGATTCTATCTCTGCGACAACAAGATACTCTGCGAGTATGATTATGAAGAGAGGCTGGTTTTTGCCAGTATGGCGGCTAATCCCAGCGGTTTAGCTCACATCAGGAGACAAGTCAGCGGATTACAGTCGCCGAGTAATGCGTACGTTGGTGGGGGCGGTTGTCCTGGAGGGGCGGTTGTGCCGTTGGTGGACAAAGATAACGGCGGATGCGCGGGCGCTGATGACGCCTCCAGCGGTTACGGCAGCCCACCTGATCCAGATGTCTGTGATGCACGATGA
>DPOGS207462-PA
MERFWHEDCLKCGCCDCRLGEVGSKLYYKADLMLCKRDYLRLFGATGNCVACNKVIPAFEMVMRAKSFVYHLECFACQQCNHRFCVGDRFYLCDNKILCEYDYEERLVFASMAANPSGLAHIRRQVSGLQSPSNAYVGGGGCPGGAVVPLVDKDNGGCAGADDASSGYGSPPDPDVCDAR-