| DPOGS207470 | ||
|---|---|---|
| Transcript | DPOGS207470-TA | 372 bp |
| Protein | DPOGS207470-PA | 123 aa |
| Genomic position | DPSCF300051 + 86436-86807 | |
| RNAseq coverage | 1892x (Rank: top 7%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL004676 | 2e-51 | 96.94% | |
| Bombyx | BGIBMGA000943-TA | 4e-55 | 87.50% | |
| Drosophila | Syb-PC | 8e-33 | 77.65% | |
| EBI UniRef50 | UniRef50_P18489-3 | 8e-31 | 68.57% | Isoform A of Synaptobrevin n=11 Tax=Pancrustacea RepID=P18489-3 |
| NCBI RefSeq | XP_001604664.1 | 5e-33 | 68.00% | PREDICTED: similar to ENSANGP00000021813 [Nasonia vitripennis] |
| NCBI nr blastp | gi|345495211 | 1e-32 | 69.61% | PREDICTED: synaptobrevin-like isoform 1 [Nasonia vitripennis] |
| NCBI nr blastx | gi|321456621 | 3e-36 | 77.89% | hypothetical protein DAPPUDRAFT_218600 [Daphnia pulex] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0016021 | 6.6e-35 | integral to membrane | |
| GO:0016192 | 6.6e-35 | vesicle-mediated transport | ||
| KEGG pathway | nvi:100121081 | 2e-32 | ||
| K13504 (VAMP2) | maps-> | Salivary secretion | ||
| SNARE interactions in vesicular transport | ||||
| Vasopressin-regulated water reabsorption | ||||
| InterPro domain | [1-101] IPR016444 | 5.9e-45 | Synaptobrevin, metazoa/fungi | |
| [14-100] IPR001388 | 6.6e-35 | Synaptobrevin | ||
| Orthology group | MCL16842 | Insect specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS207470-TA
ATGGAGAATCCCAGTGGAACTTCTGGTCCAAGAGTAAGCGACAAACGTTTAGCACAAACGCAGGCAAAAGTAGATGAGGTCGTTGGTATTATGCGTGTCAATGTAGAAAAAGTTTTAGAACGAGATCAAAAACTCTCCGAACTAGACAACAGAGCTGATGCATTGCAGCATGGTGCTGCTCAATTTGAACAGCAAGCTGGTAAGCTTAAAAGGAAATATTGGTGGCAGAACCTAAAAATGATGTTAATCATTGGCGGAATAGGAGTCGTTTTGCTTATCATTATAATTGTTTGGGCTACTTCTGGAAGTGGCAGTTCAAATCCTGCGCCCCCTGTCGTGCCACCCGTCACCGAAGCTCCATCTGGACGATAA
>DPOGS207470-PA
MENPSGTSGPRVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRKYWWQNLKMMLIIGGIGVVLLIIIIVWATSGSGSSNPAPPVVPPVTEAPSGR-