DPOGS207471 | ||
---|---|---|
Transcript | DPOGS207471-TA | 564 bp |
Protein | DPOGS207471-PA | 187 aa |
Genomic position | DPSCF300051 + 97009-100150 | |
RNAseq coverage | 23408x (Rank: top 0%) |
Annotation | ||||
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Heliconius | HMEL004675 | 2e-107 | 100.00% |   |
Bombyx | BGIBMGA000944-TA | 2e-106 | 98.40% |   |
Drosophila | CG14207-PB | 2e-68 | 71.20% |   |
EBI UniRef50 | UniRef50_Q8IQW5 | 2e-66 | 71.20% | CG14207, isoform B n=18 Tax=Pancrustacea RepID=Q8IQW5_DROME |
NCBI RefSeq | NP_001036985.1 | 5e-105 | 98.40% | heat shock protein hsp21.4 [Bombyx mori] |
NCBI nr blastp | gi|154091278 | 8e-105 | 100.00% | heat shock protein hsp21.4 [Heliconius erato] |
NCBI nr blastx | gi|154091278 | 9e-101 | 100.00% | heat shock protein hsp21.4 [Heliconius erato] |
Group | ||||
---|---|---|---|---|
KEGG pathway | bfo:BRAFLDRAFT_130908 | 2e-18 |   | |
  | K09542 (CRYAB) | maps-> | Protein processing in endoplasmic reticulum | |
InterPro domain | [97-185] IPR002068 | 5.9e-20 | Heat shock protein Hsp20 | |
[78-185] IPR008978 | 5.6e-17 | HSP20-like chaperone | ||
[93-113] IPR001436 | 2.9e-10 | Alpha crystallin/Heat shock protein | ||
Orthology group | MCL12858 |   | Insect specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS207471-TA
ATGGCTGACAGTGGTCTCAAGAGAAATATTCCGATCAAGCTTGGAGATTTTTCAGTCATCGATACTGAATTCTCTAGCATCAGGGAGAGATTTGACGCCGAAATGAGAAAAATGGAAGAAGAAATGAGCAAATTCCGATCGGAACTCATGAATAGAGAAAGCAACAATTTCTTTAAAAGCTCCACAAGCACGACCACATCATCACAACACAGTGACAGCAGACAACTCGCCGAACCAAGCCATTGGGATAGCTTAAACTCACCTCTCATTCAGGACGAAGGGGATGGCAAATCTCTGAAACTGAGATTCGATGTCAGTCAATACACCCCCGAGGAAATCGTCGTTAAGACTGTTGACAACAAATTACTGGTCCACGCCAAGCACGAGGAGAAGTCGGAGACTAAGTCTGTTTACAGAGAGTATAATAGGGAATTCCTGTTGCCGAAGGGCACCAATCCCGAGGCCATTAAGTCATCTCTATCTCGCGATGGAGTACTTACGGTGGAGGCGCCGCTGCCTCAGCTCGCCATCACCGACAGGAACATCCCCATACAGAAGCACTGA
>DPOGS207471-PA
MADSGLKRNIPIKLGDFSVIDTEFSSIRERFDAEMRKMEEEMSKFRSELMNRESNNFFKSSTSTTTSSQHSDSRQLAEPSHWDSLNSPLIQDEGDGKSLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSETKSVYREYNREFLLPKGTNPEAIKSSLSRDGVLTVEAPLPQLAITDRNIPIQKH-