Monarch geneset OGS2.0

DPOGS207503
TranscriptDPOGS207503-TA1767 bp
ProteinDPOGS207503-PA588 aa
Genomic positionDPSCF300177 - 439622-441388
RNAseq coverage191x (Rank: top 48%)
Annotation
HeliconiusHMEL0094300.093.88% 
BombyxBGIBMGA001925-TA0.090.99% 
DrosophilaNELF-B-PA0.077.49% 
EBI UniRef50UniRef50_Q9Y1130.077.49%Negative elongation factor B n=41 Tax=Coelomata RepID=NELFB_DROME
NCBI RefSeqXP_001649534.10.078.44%hypothetical protein AaeL_AAEL014752 [Aedes aegypti]
NCBI nr blastpgi|1571068970.078.44%hypothetical protein AaeL_AAEL014752 [Aedes aegypti]
NCBI nr blastxgi|1571068970.078.44%hypothetical protein AaeL_AAEL014752 [Aedes aegypti]
Group
Gene OntologyGO:00458920negative regulation of transcription, DNA-dependent
GO:00056340nucleus
KEGG pathway 
InterPro domain[9-588] IPR0104050Cofactor of BRCA1
Orthology groupMCL14294 Single-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS207503-TA
ATGGCGTCATCCAGTAAACTACCAGGAACTGGTTTGGAAGATGTAGGAGTGCCAGGACAAACATTTCTCCGAGACGCTCTTACAAGTTGCACGGACCCTTTGAAAGCTATTGAAGAATTTCAATTGGAGAATGGAATTTTATTACCATCCTTACGGCCTATGCTTCCTCTGCTAGATCTTCACGGTGTTCGAAGGCTAGACTTTCATACATCAGTATTGGAAGAATTAAGAGATAAACTAATAGCTCACATTAATGAAATGGGCGGCAAAGATAGGTTAAAAGAACACGAAAAAAAATTGAAAGAATTGTTGAATAAAAGCTTTCCTGTCGTGAAGGTTAAGGCTTTACGGCCAGTTATAATGAGTATTTTAAAAAATACTCCACATATAGATGATAAATATTTACGAGTTTTGGTCAGAGACCGAGATCTTTACAATGACACAGATACTGAAGTAAAAAGACAGATTTGGCAAGATAATCAATCTCTGTTTGGAGATGAAGTGTCTCCATTACTGAGTCAGTATATAAGGGAAAAGGAAAATATACTATTTGACCATGAGAACCTTGGAAATTTATTTTTCTCACCCTCACCGAAAGTGAGACGACAAGGAGCTGTTATTCAAAAACTAGCACATATGGTTGGTACTAGTATAAAACTATATGACATGGTATTGCAGTTTCTTCGCACTCTATTTCTTAGGACAAGAAATGTCCACTATTGTACATTGAGAGCAGAACTCTTGATGGCGCTTCATGATGTAGAGGTTCATGAAATTATATCCGTGGATCCCTGCCATAAATTCACTTGGTGTTTAGATGCATGTATTAGAGAAAGGAATGTTGATATTAAGAGGTCTAGAGAATTACAAGGTTTTCTTGACAATGTTAAGAAGGGCCACGAACAAGTTTTGGGAGATTTATCCATGACTCTCTGCGATCCATATGCAGTCAACTTTCTAGCGACATCTGCAATAAAAATCTTGCAACATTTGATTAACACCGAAGGTCTACCAAGAGACAACACAATATTGATTCTGTTATTAAGAATGTTAGCGTTAGGCTTAAGTGCTTGGGAAATAATTGATACGCAAAACTTTAAGGAGCCTAAACTTGACAGTCAAGTTGTTACGAAATATCTACCGGCGATGATGTCTCTTATGGTGGATGACCAAGTGAGAGCATTACATAATAAACTGCCACCCGATGAGAGAGAATCTGCTATAACAACCATAGAACATTCCGGCCCACCACCTGATGCTTGTGAGGCCTACATGAGAGAAAGTTCAGTGTGTGGCGTTCTTGCAATGTATTACACACTCCATGCTGCCAAGTCACGAGATAGAATAGCTATATTGAGAATATTAAGCATCCTGGGAAGCTGCAAAGACGGTAAAGCATATGAAGACCCATTCTTACATGCACTCGTGGCTCTCTTAATACAATTACCGGACGAGTTTCAAGGCGAAGATTTCAGTACCGTTCTATTTGACGAGTTCTTCTTTGCTGGTCTCTCAAAAGATAATGTCACAAGACATTTATTGAAACTGCTATGGTATATACATCCAAAATTGCCAGAAACCAGAATACATACGTTAATGAAGGCTCTGCAGCCTGGGACACAGCACAACGAATCTGTGCATAAAATGTATGAAGCGATGCAGCAGAAGATGAATGCACAAGCTGAACCTGTGCCTGCAACTAGCGAAATGGAATATCTCGACTCGCCTTTGATGAGTGTTCCTACGCCCGCGCCTTATCACATGTAG

Protein sequence:

>DPOGS207503-PA
MASSSKLPGTGLEDVGVPGQTFLRDALTSCTDPLKAIEEFQLENGILLPSLRPMLPLLDLHGVRRLDFHTSVLEELRDKLIAHINEMGGKDRLKEHEKKLKELLNKSFPVVKVKALRPVIMSILKNTPHIDDKYLRVLVRDRDLYNDTDTEVKRQIWQDNQSLFGDEVSPLLSQYIREKENILFDHENLGNLFFSPSPKVRRQGAVIQKLAHMVGTSIKLYDMVLQFLRTLFLRTRNVHYCTLRAELLMALHDVEVHEIISVDPCHKFTWCLDACIRERNVDIKRSRELQGFLDNVKKGHEQVLGDLSMTLCDPYAVNFLATSAIKILQHLINTEGLPRDNTILILLLRMLALGLSAWEIIDTQNFKEPKLDSQVVTKYLPAMMSLMVDDQVRALHNKLPPDERESAITTIEHSGPPPDACEAYMRESSVCGVLAMYYTLHAAKSRDRIAILRILSILGSCKDGKAYEDPFLHALVALLIQLPDEFQGEDFSTVLFDEFFFAGLSKDNVTRHLLKLLWYIHPKLPETRIHTLMKALQPGTQHNESVHKMYEAMQQKMNAQAEPVPATSEMEYLDSPLMSVPTPAPYHM-