Monarch geneset OGS2.0

DPOGS207542
TranscriptDPOGS207542-TA1131 bp
ProteinDPOGS207542-PA376 aa
Genomic positionDPSCF300456 + 44806-45936
RNAseq coverage90699x (Rank: top 0%)
Annotation
HeliconiusHMEL0136200.0100.00% 
BombyxBGIBMGA013945-TA0.0100.00% 
DrosophilaAct57B-PA0.098.94% 
EBI UniRef50UniRef50_P632670.092.55%Actin, gamma-enteric smooth muscle n=867 Tax=root RepID=ACTH_HUMAN
NCBI RefSeqXP_001866863.10.0100.00%actin 1 [Culex quinquefasciatus]
NCBI nr blastpgi|1571229330.0100.00%actin [Aedes aegypti]
NCBI nr blastxgi|1571229330.0100.00%actin [Aedes aegypti]
Group
KEGG pathwaycqu:CpipJ_CPIJ0164620.0 
 K05692 (ACTB_G1)maps-> Pathogenic Escherichia coli infection
    Regulation of actin cytoskeleton
    Viral myocarditis
    Bacterial invasion of epithelial cells
    Tight junction
    Adherens junction
    Arrhythmogenic right ventricular cardiomyopathy (ARVC)
    Phototransduction - fly
    Vibrio cholerae infection
    Dilated cardiomyopathy
    Shigellosis
    Leukocyte transendothelial migration
    Hypertrophic cardiomyopathy (HCM)
    Phagosome
    Focal adhesion
InterPro domain[2-376] IPR0040000Actin-like
Orthology groupMCL10033 Multiple-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS207542-TA
ATGTGCGACGACGATGTTGCTGCGCTCGTAGTAGACAATGGCTCCGGCATGTGCAAGGCCGGTTTCGCCGGTGACGACGCTCCCCGCGCCGTCTTCCCATCCATCGTGGGTCGCCCCCGTCACCAGGGTGTGATGGTCGGTATGGGCCAAAAGGACTCCTACGTCGGTGACGAGGCCCAGAGCAAGAGAGGTATCCTCACCCTGAAGTACCCCATCGAGCACGGCATTATCACCAACTGGGATGACATGGAGAAGATCTGGCACCACACCTTCTACAACGAGCTGCGCGTCGCCCCCGAGGAGCACCCCGTGCTCTTGACTGAGGCTCCCCTCAACCCCAAGGCCAACAGAGAGAAGATGACCCAGATCATGTTTGAGACCTTCAACTCCCCCGCCATGTACGTCGCCATTCAGGCCGTGCTCTCTCTGTACGCCTCAGGTCGTACCACCGGTATCGTCCTGGACTCCGGAGACGGTGTCTCCCACACCGTGCCCATCTATGAAGGTTACGCCCTCCCCCACGCCATCCTCCGTCTGGACTTGGCCGGCCGTGACTTGACCGACTACCTCATGAAGATCCTCACCGAGAGGGGTTACTCTTTCACCACCACCGCTGAGAGGGAAATCGTCCGTGACATCAAGGAGAAGCTGTGCTATGTCGCTCTCGACTTCGAGCAGGAGATGGCCACCGCTGCCGCCTCCACCTCCCTCGAGAAGTCCTACGAGCTTCCCGACGGTCAGGTCATCACCATCGGTAACGAGAGATTCCGTTGCCCCGAAGCCCTGTTCCAGCCTTCCTTCTTGGGTATGGAATCCTGCGGCATCCACGAGACCGTGTACAACTCCATCATGAAGTGTGACGTGGACATCCGTAAGGACCTGTACGCCAACACCGTCATGTCTGGTGGTACCACCATGTACCCCGGTATCGCCGACAGGATGCAGAAGGAGATCACCGCCCTGGCGCCCTCCACCATCAAGATCAAGATCATCGCTCCCCCCGAGAGGAAGTACTCCGTATGGATCGGAGGATCCATCCTCGCTTCCCTGTCCACCTTCCAGCAGATGTGGATCTCCAAGGAGGAGTACGACGAGTCCGGTCCCGGTATCGTCCACCGCAAGTGCTTCTAA

Protein sequence:

>DPOGS207542-PA
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF-