| DPOGS207569 | ||
|---|---|---|
| Transcript | DPOGS207569-TA | 417 bp |
| Protein | DPOGS207569-PA | 138 aa |
| Genomic position | DPSCF300072 - 394987-403361 | |
| RNAseq coverage | 60x (Rank: top 68%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL017801 | 2e-36 | 94.59% | |
| Bombyx | BGIBMGA004732-TA | 2e-23 | 90.74% | |
| Drosophila | heph-PY | 7e-26 | 59.80% | |
| EBI UniRef50 | UniRef50_Q95UI6 | 5e-23 | 62.77% | Hephaestus n=13 Tax=Drosophila RepID=Q95UI6_DROME |
| NCBI RefSeq | XP_966484.2 | 2e-32 | 62.20% | PREDICTED: similar to polypyrimidine tract binding protein [Tribolium castaneum] |
| NCBI nr blastp | gi|189241313 | 6e-31 | 62.20% | PREDICTED: similar to polypyrimidine tract binding protein [Tribolium castaneum] |
| NCBI nr blastx | gi|189241313 | 3e-29 | 75.53% | PREDICTED: similar to polypyrimidine tract binding protein [Tribolium castaneum] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0000166 | 9e-09 | nucleotide binding | |
| KEGG pathway | ||||
| InterPro domain | [54-95] IPR012677 | 9e-09 | Nucleotide-binding, alpha-beta plait | |
| Orthology group | MCL20423 | Insect specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS207569-TA
ATGGAATTTTGGGTCTTCTTCGGCAACGATCGGAGAGGCTCAGACGAGCTTCTTTCGCAGAGTGGCGTCACCGTCATGGCGCCCGCCGCTCCACACCATGCTGACAATAATAACCAAGATTCCGCCGCTAAAAAGGTGAAGCTTGAACAAAATGTCGGCAAGCCTTCAAGAGTTATCCACATACGGAATATACCAAATGAGACGACGGAAGCAGAGATCATACAGCTGGGTCTGCCATTTGGGAGGGTTACCAATGTTCTCGTGCTCAAAGGAAAAAATCAGGAATTAATATGTGAACTCGGTCATGTAACTACAATAGAGGCTACGGAAGCACAACAAGTGGGCGGCGCGGTCTCTGCAAATAGGCCGCTAACCATTGTGGAGTTGTACTTCATACCCGTTTTATATTACCTATAG
>DPOGS207569-PA
MEFWVFFGNDRRGSDELLSQSGVTVMAPAAPHHADNNNQDSAAKKVKLEQNVGKPSRVIHIRNIPNETTEAEIIQLGLPFGRVTNVLVLKGKNQELICELGHVTTIEATEAQQVGGAVSANRPLTIVELYFIPVLYYL-