DPOGS207596 | ||
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Transcript | DPOGS207596-TA | 951 bp |
Protein | DPOGS207596-PA | 316 aa |
Genomic position | DPSCF300072 + 1018743-1020545 | |
RNAseq coverage | 288x (Rank: top 38%) |
Annotation | ||||
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Heliconius | HMEL009731 | 8e-125 | 77.93% |   |
Bombyx | BGIBMGA004673-TA | 8e-176 | 94.30% |   |
Drosophila | elgi-PA | 1e-140 | 73.10% |   |
EBI UniRef50 | UniRef50_F4WY68 | 2e-142 | 74.84% | E3 ubiquitin-protein ligase NRDP1 n=6 Tax=Endopterygota RepID=F4WY68_ACREC |
NCBI RefSeq | XP_972869.1 | 5e-153 | 80.06% | PREDICTED: similar to conserved hypothetical protein [Tribolium castaneum] |
NCBI nr blastp | gi|91078878 | 9e-152 | 80.06% | PREDICTED: similar to conserved hypothetical protein [Tribolium castaneum] |
NCBI nr blastx | gi|91078878 | 2e-152 | 80.06% | PREDICTED: similar to conserved hypothetical protein [Tribolium castaneum] |
Group | ||||
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Gene Ontology | GO:0031386 | 1.1e-83 | protein tag | |
GO:0016881 | 1.1e-83 | acid-amino acid ligase activity | ||
GO:0016567 | 1.1e-83 | protein ubiquitination | ||
GO:0005515 | 1.3e-10 | protein binding | ||
GO:0008270 | 3.4e-06 | zinc ion binding | ||
GO:0004842 | 3.4e-06 | ubiquitin-protein ligase activity | ||
KEGG pathway | tca:661626 | 1e-152 |   | |
  | K11981 (RNF41, NRDP1) | maps-> | Endocytosis | |
InterPro domain | [137-316] IPR015036 | 1.1e-83 | USP8 interacting | |
[8-76] IPR013083 | 6.1e-16 | Zinc finger, RING/FYVE/PHD-type | ||
[78-197] IPR008974 | 1.3e-10 | TRAF-like | ||
[18-54] IPR018957 | 3.3e-09 | Zinc finger, C3HC4 RING-type | ||
[81-132] IPR013323 | 3.4e-06 | Seven In Absentia Homolog-type | ||
Orthology group | MCL13078 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS207596-TA
ATGGGCTTTGAAATCAAAAGGTTTCAAGGTGACGTCGACGAAGAACTTATTTGCCCTATTTGTTCGGGAGTTCTAGAAGATCCATTACAGGCACCTGCATGCGAGCATGCATTTTGCCGTGTCTGCATAACTGAGTGGATAAGTCGCCAACCGACTTGCCCAGTGGACAGGCAGGCTGTTACCGCATGTCAGCTAAGACCCGTTCCTAGAATACTACGCAACCTGCTATCTAGATTATGCACAAGTTGCGACAACTCACCTCATGGATGCAATGCTGTGCTGAAACTGGACTCACTGGCATCACATTTAGTTGAATGCGAATTTAACCCTAAGCGGCCAATGCCTTGTGAAGCAGGCTGTGGTTTAGTCATACCGAAAGATGAGCTGGCAGAGCACAACTGTGTGCGAGAGTTGCGTGCATTAATAACTTCCCAGCAGGGTAAGCTCACGGACTACCAGCAGGAGCTAGCAGAACAAAGACTGGTCATCAATGAACACAAAAGGGAATTGGCTCTACTTAAAGAGTTCATGCGTGCAATGCGTGTGTCAAATCCTACAATGCGAGCACTAGCCGATCAGATGGAGCGTGACGAAGTTGTGCGGTGGGCTGGATCACTAGCCAGGGCCAGAGTCACCCGCTGGGGTGGCATGATCTCTACACCTGATGACGTCCTGCAGGTGATGATGATTAAGAGAAGCTTATCAGAATCTGGATGTCCTCCACACATTATTGATGATCTGATGGAAAATTGCCATGAGAGGCGATGGCCACCTGGTCTCTCTTCCTTAGAAACTAGACAGAACAATAGAAGATTATATGAAAAATATGTATGCAAAAGAGTTCCTGGAAAGCAAGCGGTACTAGTCTTGCAGTGTGACAATACTCATGTCGATGAACATATGATGGTAGAACCTGGTCTTGTAATGATATTTGCTCATGGCATTGAATAA
>DPOGS207596-PA
MGFEIKRFQGDVDEELICPICSGVLEDPLQAPACEHAFCRVCITEWISRQPTCPVDRQAVTACQLRPVPRILRNLLSRLCTSCDNSPHGCNAVLKLDSLASHLVECEFNPKRPMPCEAGCGLVIPKDELAEHNCVRELRALITSQQGKLTDYQQELAEQRLVINEHKRELALLKEFMRAMRVSNPTMRALADQMERDEVVRWAGSLARARVTRWGGMISTPDDVLQVMMIKRSLSESGCPPHIIDDLMENCHERRWPPGLSSLETRQNNRRLYEKYVCKRVPGKQAVLVLQCDNTHVDEHMMVEPGLVMIFAHGIE-