| DPOGS207623 | ||
|---|---|---|
| Transcript | DPOGS207623-TA | 777 bp |
| Protein | DPOGS207623-PA | 258 aa |
| Genomic position | DPSCF300199 - 210489-213520 | |
| RNAseq coverage | 131x (Rank: top 56%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL009316 | 6e-118 | 86.21% | |
| Bombyx | BGIBMGA014549-TA | 3e-64 | 68.22% | |
| Drosophila | al-PA | 2e-50 | 55.29% | |
| EBI UniRef50 | UniRef50_G6DBX9 | 4e-71 | 60.44% | Paired-like family homeodomain transcription factor n=3 Tax=Nymphalidae RepID=G6DBX9_DANPL |
| NCBI RefSeq | NP_001107838.1 | 2e-59 | 57.03% | aristaless [Tribolium castaneum] |
| NCBI nr blastp | gi|281485130 | 8e-116 | 86.59% | paired-like family homeodomain transcription factor [Heliconius erato] |
| NCBI nr blastx | gi|281485130 | 2e-124 | 86.59% | paired-like family homeodomain transcription factor [Heliconius erato] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0006355 | 6.3e-30 | regulation of transcription, DNA-dependent | |
| GO:0043565 | 6.3e-30 | sequence-specific DNA binding | ||
| GO:0003700 | 6.3e-30 | sequence-specific DNA binding transcription factor activity | ||
| GO:0003677 | 9.4e-30 | DNA binding | ||
| GO:0005515 | 1.8e-27 | protein binding | ||
| GO:0005634 | 3.2e-06 | nucleus | ||
| GO:0007275 | 2.6e-05 | multicellular organismal development | ||
| KEGG pathway | ||||
| InterPro domain | [38-100] IPR001356 | 6.3e-30 | Homeobox | |
| [24-98] IPR012287 | 9.4e-30 | Homeodomain-related | ||
| [29-107] IPR009057 | 1.8e-27 | Homeodomain-like | ||
| [67-76] IPR000047 | 3.2e-06 | Helix-turn-helix motif, lambda-like repressor | ||
| Orthology group | MCL20935 | Lepidoptera specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS207623-TA
ATGGGAGTGTCTGATACCGGTTCATCCGCTACTCCTGAACTACCAGTCCACGATATCGATCGGCCAGGGTCGGGTAGTGGAGTCGATGACGAAGACATCCCGAGGAGGAAACAGAGGAGGTACAGAACGACCTTCACCAGCTACCAACTAGATGAACTGGAGAAAGCCTTCGGAAGAACTCACTATCCAGATGTTTTTACAAGGGAGGAATTGGCTCTCAAAATTGGACTCACTGAAGCAAGAATACAGGTGTGGTTTCAAAACCGGAGAGCAAAATGGCGCAAGCAAGAAAAGGTGGGTCCCCACGCTCATCCCTACGGCGGATACTTGGGAGGACAGCCTTTGCCAACAGCCGCAATGCCAGTATCGCCACACTCACTGACACAACTTGGCTTCGGATTGAGGAAGCCTTTCGACAGCTCCTTGGCTACATTCAGGTATGCCAGTAGTCCACTGTTTGGGACGCAATACCTACCACCGCTGACCCGGCCTCATCTATTCGGTGCTCCGTTGTACGCCACCTCGCCAGCTCATTTTCATTCTCTTTTCGCTAACCTAACCGCACCAGAACCACCGCGCGCATCACCCGAACATTCCCGATTATCCCCCGAGGTCACCCGATCTCCATCTCTTTCTCCCCCCATCTCCCCCGGTAGTGAAACTCTCCCCCACGTTGAAGATGTTAGAAGTTCCAGTATAGCAGCCTTAAGGCTAGCTGCGAGAGAACACGAATTAAGATTAGAACTGTTGCGGCAAAGAGCCGATTTAATTTGTTAG
>DPOGS207623-PA
MGVSDTGSSATPELPVHDIDRPGSGSGVDDEDIPRRKQRRYRTTFTSYQLDELEKAFGRTHYPDVFTREELALKIGLTEARIQVWFQNRRAKWRKQEKVGPHAHPYGGYLGGQPLPTAAMPVSPHSLTQLGFGLRKPFDSSLATFRYASSPLFGTQYLPPLTRPHLFGAPLYATSPAHFHSLFANLTAPEPPRASPEHSRLSPEVTRSPSLSPPISPGSETLPHVEDVRSSSIAALRLAAREHELRLELLRQRADLIC-