DPOGS207630 | ||
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Transcript | DPOGS207630-TA | 948 bp |
Protein | DPOGS207630-PA | 315 aa |
Genomic position | DPSCF300199 - 42952-45434 | |
RNAseq coverage | 693x (Rank: top 18%) |
Annotation | ||||
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Heliconius | HMEL009827 | 3e-147 | 82.86% |   |
Bombyx | BGIBMGA006014-TA | 0.0 | 99.05% |   |
Drosophila | TfIIB-PA | 3e-167 | 89.21% |   |
EBI UniRef50 | UniRef50_P29052 | 4e-165 | 89.21% | Transcription initiation factor IIB n=23 Tax=Eukaryota RepID=TF2B_DROME |
NCBI RefSeq | XP_395432.1 | 9e-169 | 91.11% | PREDICTED: similar to Transcription initiation factor IIB (General transcription factor TFIIB) isoform 1 [Apis mellifera] |
NCBI nr blastp | gi|383862315 | 2e-168 | 91.75% | PREDICTED: transcription initiation factor IIB-like [Megachile rotundata] |
NCBI nr blastx | gi|383862315 | 9e-162 | 91.75% | PREDICTED: transcription initiation factor IIB-like [Megachile rotundata] |
Group | ||||
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Gene Ontology | GO:0006355 | 4.2e-188 | regulation of transcription, DNA-dependent | |
GO:0008270 | 4.2e-188 | zinc ion binding | ||
GO:0006352 | 4.2e-188 | transcription initiation, DNA-dependent | ||
GO:0006413 | 5.5e-27 | translational initiation | ||
GO:0003743 | 5.5e-27 | translation initiation factor activity | ||
KEGG pathway | ame:411965 | 2e-168 |   | |
  | K03124 (TFIIB) | maps-> | Basal transcription factors | |
InterPro domain | [5-315] IPR000812 | 4.2e-188 | Transcription factor TFIIB | |
[115-215] IPR013763 | 2.6e-38 | Cyclin-like | ||
[120-190] IPR013150 | 5.5e-27 | Transcription factor TFIIB, cyclin-related | ||
[13-54] IPR013137 | 8.6e-13 | Zinc finger, TFIIB-type | ||
Orthology group | MCL13602 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS207630-TA
ATGGCGAGCACGTCGAGAATCGAAGCTAATAAGGTGGTGTGTTATGCTCATCCCGATGCCCCGCTTATTGAGGATTATCGAGCGGGTGACATGATATGTTCAGAATGCGGCCTCGTTGTTGGCGACAGAGTTATAGATGTAGGTTCAGAATGGCGTACCTTCAGCAATGAGAAATCTGGAGTCGATCCATCTCGTGTGGGAGGTCCGGAAAATCCTTTGCTATCAGGAGGGGATCTCTCCACTATCATTGGTCCCGGAAGAGGCGATGCTTCCTTTGACAGTTTTGGGGTATCCAAATATCAAAACCGAAGAAATATAAGCAGCACAGACAGAGCGCTTATAAATGCGTTTAGAGAAATAAACACTATGGCTGATAGAATTAATCTGCCTAAAACTATAGTGGACAGAGCCAATAATTTGTTTAAACAGGTACACGATGGAAAAAATTTAAAAGGCAGAGCAAACGATGCAATAGCCTCAGCATGTCTATATATAGCTTGCCGGCAGGAAGGAGTGCCGAGAACATTCAAAGAAATCTGTGCGGTTAGTAAAATTAGTAAGAAAGAAATTGGAAGATGTTTCAAACTGATCCTTAAGGCTTTGGAAACGTCAGTGGACTTGATAACAACAGCAGATTTCATGTCTCGGTTTTGTGCCAATCTGGGTTTACCAAACTCAGTGCAACGAGCTGCAACACATATTGCAAGGAAAGCCGGGGAATTGGACATTGTGTCTGGAAGAAGTCCCATATCTGTGGCAGCCGCTGCCATATATATGGCTTCACAGGCGTCCGAGGATAAGCGTAGTCAGAAAGAGATTGGTGATATAGCCGGTGTAGCGGATGTAACGATCAGACAGTCATACAAATTGATGTATCCATGTGCCGCAAAATTGTTCCCCGAAGACTTCAAGTTCGCTACACCCATTGAATTCCTACCGCAAATGTAA
>DPOGS207630-PA
MASTSRIEANKVVCYAHPDAPLIEDYRAGDMICSECGLVVGDRVIDVGSEWRTFSNEKSGVDPSRVGGPENPLLSGGDLSTIIGPGRGDASFDSFGVSKYQNRRNISSTDRALINAFREINTMADRINLPKTIVDRANNLFKQVHDGKNLKGRANDAIASACLYIACRQEGVPRTFKEICAVSKISKKEIGRCFKLILKALETSVDLITTADFMSRFCANLGLPNSVQRAATHIARKAGELDIVSGRSPISVAAAAIYMASQASEDKRSQKEIGDIAGVADVTIRQSYKLMYPCAAKLFPEDFKFATPIEFLPQM-