| DPOGS207630 | ||
|---|---|---|
| Transcript | DPOGS207630-TA | 948 bp |
| Protein | DPOGS207630-PA | 315 aa |
| Genomic position | DPSCF300199 - 42952-45434 | |
| RNAseq coverage | 693x (Rank: top 18%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL009827 | 3e-147 | 82.86% | |
| Bombyx | BGIBMGA006014-TA | 0.0 | 99.05% | |
| Drosophila | TfIIB-PA | 3e-167 | 89.21% | |
| EBI UniRef50 | UniRef50_P29052 | 4e-165 | 89.21% | Transcription initiation factor IIB n=23 Tax=Eukaryota RepID=TF2B_DROME |
| NCBI RefSeq | XP_395432.1 | 9e-169 | 91.11% | PREDICTED: similar to Transcription initiation factor IIB (General transcription factor TFIIB) isoform 1 [Apis mellifera] |
| NCBI nr blastp | gi|383862315 | 2e-168 | 91.75% | PREDICTED: transcription initiation factor IIB-like [Megachile rotundata] |
| NCBI nr blastx | gi|383862315 | 9e-162 | 91.75% | PREDICTED: transcription initiation factor IIB-like [Megachile rotundata] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0006355 | 4.2e-188 | regulation of transcription, DNA-dependent | |
| GO:0008270 | 4.2e-188 | zinc ion binding | ||
| GO:0006352 | 4.2e-188 | transcription initiation, DNA-dependent | ||
| GO:0006413 | 5.5e-27 | translational initiation | ||
| GO:0003743 | 5.5e-27 | translation initiation factor activity | ||
| KEGG pathway | ame:411965 | 2e-168 | ||
| K03124 (TFIIB) | maps-> | Basal transcription factors | ||
| InterPro domain | [5-315] IPR000812 | 4.2e-188 | Transcription factor TFIIB | |
| [115-215] IPR013763 | 2.6e-38 | Cyclin-like | ||
| [120-190] IPR013150 | 5.5e-27 | Transcription factor TFIIB, cyclin-related | ||
| [13-54] IPR013137 | 8.6e-13 | Zinc finger, TFIIB-type | ||
| Orthology group | MCL13602 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS207630-TA
ATGGCGAGCACGTCGAGAATCGAAGCTAATAAGGTGGTGTGTTATGCTCATCCCGATGCCCCGCTTATTGAGGATTATCGAGCGGGTGACATGATATGTTCAGAATGCGGCCTCGTTGTTGGCGACAGAGTTATAGATGTAGGTTCAGAATGGCGTACCTTCAGCAATGAGAAATCTGGAGTCGATCCATCTCGTGTGGGAGGTCCGGAAAATCCTTTGCTATCAGGAGGGGATCTCTCCACTATCATTGGTCCCGGAAGAGGCGATGCTTCCTTTGACAGTTTTGGGGTATCCAAATATCAAAACCGAAGAAATATAAGCAGCACAGACAGAGCGCTTATAAATGCGTTTAGAGAAATAAACACTATGGCTGATAGAATTAATCTGCCTAAAACTATAGTGGACAGAGCCAATAATTTGTTTAAACAGGTACACGATGGAAAAAATTTAAAAGGCAGAGCAAACGATGCAATAGCCTCAGCATGTCTATATATAGCTTGCCGGCAGGAAGGAGTGCCGAGAACATTCAAAGAAATCTGTGCGGTTAGTAAAATTAGTAAGAAAGAAATTGGAAGATGTTTCAAACTGATCCTTAAGGCTTTGGAAACGTCAGTGGACTTGATAACAACAGCAGATTTCATGTCTCGGTTTTGTGCCAATCTGGGTTTACCAAACTCAGTGCAACGAGCTGCAACACATATTGCAAGGAAAGCCGGGGAATTGGACATTGTGTCTGGAAGAAGTCCCATATCTGTGGCAGCCGCTGCCATATATATGGCTTCACAGGCGTCCGAGGATAAGCGTAGTCAGAAAGAGATTGGTGATATAGCCGGTGTAGCGGATGTAACGATCAGACAGTCATACAAATTGATGTATCCATGTGCCGCAAAATTGTTCCCCGAAGACTTCAAGTTCGCTACACCCATTGAATTCCTACCGCAAATGTAA
>DPOGS207630-PA
MASTSRIEANKVVCYAHPDAPLIEDYRAGDMICSECGLVVGDRVIDVGSEWRTFSNEKSGVDPSRVGGPENPLLSGGDLSTIIGPGRGDASFDSFGVSKYQNRRNISSTDRALINAFREINTMADRINLPKTIVDRANNLFKQVHDGKNLKGRANDAIASACLYIACRQEGVPRTFKEICAVSKISKKEIGRCFKLILKALETSVDLITTADFMSRFCANLGLPNSVQRAATHIARKAGELDIVSGRSPISVAAAAIYMASQASEDKRSQKEIGDIAGVADVTIRQSYKLMYPCAAKLFPEDFKFATPIEFLPQM-