| DPOGS207692 | ||
|---|---|---|
| Transcript | DPOGS207692-TA | 567 bp |
| Protein | DPOGS207692-PA | 188 aa |
| Genomic position | DPSCF300502 - 480-5289 | |
| RNAseq coverage | 130x (Rank: top 56%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL007792 | 1e-30 | 43.15% | |
| Bombyx | BGIBMGA009578-TA | 6e-31 | 43.45% | |
| Drosophila | CG3225-PA | 5e-38 | 47.47% | |
| EBI UniRef50 | UniRef50_E4WVS8 | 8e-39 | 48.47% | Whole genome shotgun assembly, reference scaffold set, scaffold scaffold_3 n=2 Tax=Oikopleura dioica RepID=E4WVS8_OIKDI |
| NCBI RefSeq | XP_002424699.1 | 4e-42 | 52.07% | ATP-dependent RNA helicase, putative [Pediculus humanus corporis] |
| NCBI nr blastp | gi|242007776 | 7e-41 | 52.07% | ATP-dependent RNA helicase, putative [Pediculus humanus corporis] |
| NCBI nr blastx | gi|307183447 | 3e-39 | 49.40% | Probable ATP-dependent RNA helicase DHX35 [Camponotus floridanus] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005524 | 1.1e-05 | ATP binding | |
| GO:0008026 | 1.1e-05 | ATP-dependent helicase activity | ||
| GO:0003676 | 1.1e-05 | nucleic acid binding | ||
| KEGG pathway | ||||
| Orthology group | ||||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS207692-TA
ATGCTCATGATGAAAAATATCATCAGCAGACTCTTGGTAAACTGTAGCGGGTCGAGACAGTATATGTACGAGGTTGGTCACAATGTCTGCGTTACCCAGCCCAGGGTGACGGCTGCTGTGTCCCTGGCATGCAGGGTATCTGAAGAGAGGGGAAGTACCCTGGGGGAAATCGTGGGGTACGCTGCTGGTATGATATCCATACGTGCTCCAGACACTCCTATCGTGTTTATGACGGAAGGTGTCCTATTGCGAGAGATGTTTGCTTCACCGCTCTTGATGCAGTATTCTTGTGTTGTTCTCGATGAGGTTCACGAGAGATCTCAGATGACTGATGTTCTGATGGGTCTATTGAAGAAAATAGCGAGGAAACGTAAAAATCTTAAACTAATTATATCTTCTGCGACAATGGACGCCGATTTCCTGAAAGATTTCTTTAATTTAAACAAAGACCAGACGAACAGCACGTCTGTCATCATGTCCATGCGGGGACGGACGTATCCCATAGATATATTCTATGTTCAAGGTAAAATTTTATATTATAACCATCGTATAGAAAAAAATATATAA
>DPOGS207692-PA
MLMMKNIISRLLVNCSGSRQYMYEVGHNVCVTQPRVTAAVSLACRVSEERGSTLGEIVGYAAGMISIRAPDTPIVFMTEGVLLREMFASPLLMQYSCVVLDEVHERSQMTDVLMGLLKKIARKRKNLKLIISSATMDADFLKDFFNLNKDQTNSTSVIMSMRGRTYPIDIFYVQGKILYYNHRIEKNI-