| DPOGS207701 | ||
|---|---|---|
| Transcript | DPOGS207701-TA | 543 bp |
| Protein | DPOGS207701-PA | 180 aa |
| Genomic position | DPSCF300042 - 1677757-1678820 | |
| RNAseq coverage | 780x (Rank: top 17%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL008421 | 1e-65 | 70.22% | |
| Bombyx | BGIBMGA009934-TA | 3e-65 | 67.23% | |
| Drosophila | mRpS18A-PA | 7e-44 | 56.55% | |
| EBI UniRef50 | UniRef50_Q295N6 | 3e-42 | 53.94% | GA16258 n=4 Tax=Sophophora RepID=Q295N6_DROPS |
| NCBI RefSeq | XP_001998354.1 | 6e-45 | 55.15% | GI23675 [Drosophila mojavensis] |
| NCBI nr blastp | gi|195107508 | 9e-44 | 55.15% | GI23675 [Drosophila mojavensis] |
| NCBI nr blastx | gi|195107508 | 1e-41 | 55.15% | GI23675 [Drosophila mojavensis] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005840 | 1.2e-16 | ribosome | |
| GO:0006412 | 1.2e-16 | translation | ||
| GO:0005622 | 1.2e-16 | intracellular | ||
| GO:0003735 | 1.2e-16 | structural constituent of ribosome | ||
| KEGG pathway | ||||
| InterPro domain | [70-138] IPR001648 | 1.2e-16 | Ribosomal protein S18 | |
| Orthology group | MCL13302 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS207701-TA
ATGGCTTTACTAGCTAGAACGGGTGTTTCTTTTTTAAAGAATGCAGTGCTTTCAACATCTGTACGAACGTTATCATTAACAAATAAGTTAAATTTAAAAGAATTACAAGAACGCAAAGAAGGCTCAACTCTTGTAGTAGAAGGTGTAAATGTTCCTTCACCTCGGACTGAATTGCTAATTCGTGCTGAAAATATAAAGGATTTAGTTCAACCTGAAGGGACCCCAAAGGAAACCTGTTACATGTGTGCCCTGGGCTTGGATGTGAAGCATACTGATGTGTTAATTCTGAGTCAATTCGTCAGATCTGACGGCTGTATGTTACCTCGACGTATAACTGGTTTGTGTCGACGCCAACAGAAAAAAATTGGGAAAATGGTGTCCATGGCACAGAAAGCTGGTTTGATGATAAATCTGACACCGAGTTTCTGTAAAAAAGATCCTAAGAAGAGGTACGGCTTTAAGAAGTTCAACTCATATTTCGATGAAACAACAATATTCCAGAAGAAAATACCAACGCCCTTTGAACATTTGAAGAATCGATAA
>DPOGS207701-PA
MALLARTGVSFLKNAVLSTSVRTLSLTNKLNLKELQERKEGSTLVVEGVNVPSPRTELLIRAENIKDLVQPEGTPKETCYMCALGLDVKHTDVLILSQFVRSDGCMLPRRITGLCRRQQKKIGKMVSMAQKAGLMINLTPSFCKKDPKKRYGFKKFNSYFDETTIFQKKIPTPFEHLKNR-