Monarch geneset OGS2.0

DPOGS207725
TranscriptDPOGS207725-TA2160 bp
ProteinDPOGS207725-PA719 aa
Genomic positionDPSCF300042 - 1080639-1089012
RNAseq coverage698x (Rank: top 18%)
Annotation
HeliconiusHMEL0153070.079.86% 
BombyxBGIBMGA005288-TA0.087.14% 
DrosophilaSsrp-PA0.061.81% 
EBI UniRef50UniRef50_Q293F60.060.58%FACT complex subunit Ssrp1 n=25 Tax=Coelomata RepID=SSRP1_DROPS
NCBI RefSeqXP_973014.10.072.14%PREDICTED: similar to AGAP012335-PA [Tribolium castaneum]
NCBI nr blastpgi|3838595890.070.88%PREDICTED: FACT complex subunit Ssrp1-like [Megachile rotundata]
NCBI nr blastxgi|3838595890.070.00%PREDICTED: FACT complex subunit Ssrp1-like [Megachile rotundata]
Group
Gene OntologyGO:00056341e-97nucleus
GO:00036771e-97DNA binding
GO:00055156.6e-21protein binding
KEGG pathway 
InterPro domain[209-422] IPR0009691e-97Structure-specific recognition protein
[546-614] IPR0009109.8e-24High mobility group, HMG1/HMG2
[544-616] IPR0090716.6e-21High mobility group, superfamily
Orthology groupMCL13533 Single-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS207725-TA
ATGGAATTTTTAGAGTACAACGATGTTTCTGCGGAGATTAAAGGAGCTATGGTTCCAGGCAGATTAAAAATGACAGATCAGAGTATAGTATTTAAAAACAGCAAAACTGGCAAAGTGGAACAGATATCATCAAACGATATAGAACTCGTTAACTTCCAAAAGTTCATTGGATCGTGGGGTCTCAGAATATTCTTAAAAAATGGCACTCTACATAGGTACGGTGGATTTAAGGAAGGGGAACAAGAGAAAGTTGCCAAATTCTTCAAAAGCAACTATCACAAGGACATGTTAGAAAAGGAACTGTCTCTCAAAGGTTGGAACTGGGGTACGGCTAAGTTCAACGGAGCGGTCCTGAGTTTTAATGTAGGCTCGAATACTGCCTTCGAAATACCCTTACACAATGTGTCACAATGTAATACCGGCAAGAACGAGGTTACACTTGAATTCCATCAGAACGATGACACACCGGTGTCATTGATGGAGATGCGTTTCCACATTCCCACGAGCGAGCTGGCGGGTGATATGGACGCGGTGGACGCCTTCCATCAGCAGGTCATGAACAAGGCCAGTGTTATTTCCGTTTCCGGTGACGCCATTGCTATATTCAGGGAACTACAGTGTCTCACACCTCGCGGCCGCTACGACATCAAAGTGTTTCAAACGTTCTTCCAACTCCACGGTAAGACTTTCGATTACAAAATACCGATGTCGACCGTCCTGCGTCTCTTCCTGCTGCCTCATAAGGACACGCGGCAAATGTTCTTCGTGGTGTCCCTCGACCCGCCCATCAAACAGGGACAAACCAGATACCACTATCTGGTGTTACTCTTCGGTATCGAGGAGGAAACCAGCCTGGAACTGCCATTCACTGAGGAGGATCTGAAGGAGAAATACGAAGGGAAGATCACTAAAGAGCTATCTGGTCCGACTTATGAAGTACTGGCAAAAATTATGAAAGTTATCATTAACAGACGAGTCACAGGTCCCGGAGATTTCTTGGGGCATCACAAGACCCCAGCGATCGCCTGCTCGTACAAGGCCGCGGCGGGCTACCTGTACCCGCTCGAGAAGGGTTTCATCTACGTGCACAAGCCACCCGTGCATATACGGTTTGAAGAGATCGCATCCGTTAACTTCGCCAGAGGAGGCGCTTCATCCACTAAATCGTTTGATTTCGAAATAGAATTGAAGTCGGGCAGCGTTCACACATTCAGCAGCATCGAGAAAGGGGAATACGACAAGCTGTTTGACTATATCACCTCCAAGAAACTGCACGTCAAGAACACGGGCAAGAATGACAAGGCGTTATACGACGACGATTTCGGCGACTCGGACACGGAGAAGGAGCCGGACGCGTACCTCGCGAGGGTGAAGGCGGAGGCCGAGGAGCGAGACGTCGACGACTCCGACGAGAGCACCGACGAGGACTTCAACCCCGACAAGGCCAAAGAGAGCGACGTCGCCGAGGAGTACGACACCAACCCCTCGTCCTCCGAAGACTCGGACGCTTCCGGTGGTTCAGGAGACAGCAAAAAGGAAAAAAAGAAAGAAAAGAAACCAAAGAAAACCATCACTATTTCAGAACAGCCGAGGAAACGTAAAGAGAAATCCAAGAAACGCGAAAAGGACGTGAACGCGCCCAAGAGACCCTCCACGGCGTTCATGTTGTGGCTCAGCGAACACAGGAAAGGCATCATAGACGACAACCCCGGCATCAAAGTTACTGAGATAGCCAAGAAGGGGGGAGAGCTGTGGAGGGATCTGAAGGATAAGACGCAATGGGAGGAGAAAGCAAACAAGGCTAAAGAAGAATACAATCAAGCAATGAAGAAGTACAAAGACAGCGGAGCGGCTGACGAGTTCAAACAGAAGAAGAAACAAGCGGAAAAAGACAAGAAAGCAGCTGATAAGAAGTCAAAGGCACCGAGCAAACCCAAACAAAGCAAGAACACCAGCGCTGGCTCAGGCTCTGGCAAGTTCACCAGCAAGGAGTATGTAGAGGACGACGACAGCTCCTCTGACTCGGATAAGGAAAAGAAAGATAAAAAAGATACAAAAGATAGTAAGGATACAAAGAAGAGCAAGGCCAAGTCTTCATCGTCGGAAGCGGAATCGTCCGCCTCTGGCGATGAAAGCGGGAGCGGGAGCGGGAGCGATTAA

Protein sequence:

>DPOGS207725-PA
MEFLEYNDVSAEIKGAMVPGRLKMTDQSIVFKNSKTGKVEQISSNDIELVNFQKFIGSWGLRIFLKNGTLHRYGGFKEGEQEKVAKFFKSNYHKDMLEKELSLKGWNWGTAKFNGAVLSFNVGSNTAFEIPLHNVSQCNTGKNEVTLEFHQNDDTPVSLMEMRFHIPTSELAGDMDAVDAFHQQVMNKASVISVSGDAIAIFRELQCLTPRGRYDIKVFQTFFQLHGKTFDYKIPMSTVLRLFLLPHKDTRQMFFVVSLDPPIKQGQTRYHYLVLLFGIEEETSLELPFTEEDLKEKYEGKITKELSGPTYEVLAKIMKVIINRRVTGPGDFLGHHKTPAIACSYKAAAGYLYPLEKGFIYVHKPPVHIRFEEIASVNFARGGASSTKSFDFEIELKSGSVHTFSSIEKGEYDKLFDYITSKKLHVKNTGKNDKALYDDDFGDSDTEKEPDAYLARVKAEAEERDVDDSDESTDEDFNPDKAKESDVAEEYDTNPSSSEDSDASGGSGDSKKEKKKEKKPKKTITISEQPRKRKEKSKKREKDVNAPKRPSTAFMLWLSEHRKGIIDDNPGIKVTEIAKKGGELWRDLKDKTQWEEKANKAKEEYNQAMKKYKDSGAADEFKQKKKQAEKDKKAADKKSKAPSKPKQSKNTSAGSGSGKFTSKEYVEDDDSSSDSDKEKKDKKDTKDSKDTKKSKAKSSSSEAESSASGDESGSGSGSD-