DPOGS207726 | ||
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Transcript | DPOGS207726-TA | 615 bp |
Protein | DPOGS207726-PA | 204 aa |
Genomic position | DPSCF300042 - 1075031-1077101 | |
RNAseq coverage | 7600x (Rank: top 2%) |
Annotation | ||||
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Heliconius | HMEL015307 | 5e-23 | 49.50% |   |
Bombyx | BGIBMGA005289-TA | 1e-33 | 93.10% |   |
Drosophila | HmgZ-PA | 1e-25 | 66.23% |   |
EBI UniRef50 | UniRef50_E3WKD9 | 3e-25 | 71.62% | Putative uncharacterized protein n=1 Tax=Anopheles darlingi RepID=E3WKD9_ANODA |
NCBI RefSeq | NP_001093087.1 | 5e-32 | 93.10% | mobility group protein 1B [Bombyx mori] |
NCBI nr blastp | gi|151301198 | 7e-31 | 93.10% | mobility group protein 1B [Bombyx mori] |
NCBI nr blastx | gi|151301198 | 2e-55 | 90.00% | mobility group protein 1B [Bombyx mori] |
Group | ||||
---|---|---|---|---|
Gene Ontology | GO:0003677 | 5.1e-25 | DNA binding | |
GO:0005515 | 2.3e-22 | protein binding | ||
KEGG pathway |   | |||
InterPro domain | [88-156] IPR000910 | 5.1e-25 | High mobility group, HMG1/HMG2 | |
[86-158] IPR009071 | 2.3e-22 | High mobility group, superfamily | ||
Orthology group | MCL18302 |   | Insect specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS207726-TA
ATGAAAGATATTTGCAATAAAGAAATAGTCTTGTACTGTTACTTATACGCGGGGGTTATTAAAGGAGCAAAAGATAAGATATTTCGGATAGGTGGCGCTGCGGTAGCGACGCGAGACGGCCCCAAGCTAGCTTGCACTGGGAACATTACTTCGAGCCCCATACATTTTCTTCTGGTTCTCTACGTCTGCAGTTTGGTTGTGTACCAGTTCAAAAATTATTTCAAAATTTTTGCCATCAGGAAAAAAGTTAAAATGACGGACAAGCCGAAGCGTCCTATGTCAGCATATATGCTTTGGCTAAATAGTGCACGAGAACAAATTAAGTCCGAAAATCCGGGACTTAAAGTTACCGAAATTGCCAAAAAGGGAGGCGAAATATGGAGATCAATGAAAGACAAGACTGTTTGGGAGGAAAAGGCGGCTAAAGCTAAGGAGCAATACACAAAAGACTTGGAGTCATATAATGCTAATGGAGGCGGTGGTGAAGGTGGCGGTAAAAAGGCACAGAAAAGAGGAAAGAAGGGCAAGAAAGCTTCCCCTGCTAAGGCAAAGAAGAAGAAGGAGGAATCAGATGAAGAAGAAGCTGGTGAGGAGGAAGAGGAAGAAAGCGAATGA
>DPOGS207726-PA
MKDICNKEIVLYCYLYAGVIKGAKDKIFRIGGAAVATRDGPKLACTGNITSSPIHFLLVLYVCSLVVYQFKNYFKIFAIRKKVKMTDKPKRPMSAYMLWLNSAREQIKSENPGLKVTEIAKKGGEIWRSMKDKTVWEEKAAKAKEQYTKDLESYNANGGGGEGGGKKAQKRGKKGKKASPAKAKKKKEESDEEEAGEEEEEESE-