| DPOGS207755 | ||
|---|---|---|
| Transcript | DPOGS207755-TA | 207 bp |
| Protein | DPOGS207755-PA | 68 aa |
| Genomic position | DPSCF300042 - 452345-452920 | |
| RNAseq coverage | 147x (Rank: top 54%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL011957 | 1e-24 | 84.48% | |
| Bombyx | BGIBMGA007804-TA | 3e-07 | 41.38% | |
| Drosophila | Mmp2-PB | 3e-09 | 47.06% | |
| EBI UniRef50 | UniRef50_UPI0001925E90 | 5e-11 | 48.33% | UPI0001925E90 related cluster n=1 Tax=unknown RepID=UPI0001925E90 |
| NCBI RefSeq | XP_002163794.1 | 8e-12 | 48.33% | PREDICTED: similar to matrix metalloproteinase [Hydra magnipapillata] |
| NCBI nr blastp | gi|307207362 | 4e-11 | 53.45% | Matrix metalloproteinase-17 [Harpegnathos saltator] |
| NCBI nr blastx | gi|307207362 | 7e-12 | 53.45% | Matrix metalloproteinase-17 [Harpegnathos saltator] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0008152 | 5.6e-08 | metabolic process | |
| KEGG pathway | ||||
| InterPro domain | [11-68] IPR024079 | 7e-14 | Metallopeptidase, catalytic domain | |
| [11-40] IPR002477 | 5.6e-08 | Peptidoglycan binding-like | ||
| Orthology group | MCL19708 | Insect specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS207755-TA
ATGTTCGGATATTTAAAGAAGGGGAGACCAGAAGAGTTCGGAGGCATACCCGTGACGGGTGTTATAGATAACGCGACGCAAGAATTGATGAAGAAGAAGCGATGTGGCCGACCTGACAGAGAACCCGGAGAAGAAAACGGCAGCAGGAGGAAAAGATTTGCCGTACAGGGGGAGAAGTGGAAACACACTAACTTAACTTGGAGGTAA
>DPOGS207755-PA
MFGYLKKGRPEEFGGIPVTGVIDNATQELMKKKRCGRPDREPGEENGSRRKRFAVQGEKWKHTNLTWR-