| DPOGS207776 | ||
|---|---|---|
| Transcript | DPOGS207776-TA | 216 bp |
| Protein | DPOGS207776-PA | 71 aa |
| Genomic position | DPSCF300042 - 71487-73464 | |
| RNAseq coverage | 17x (Rank: top 81%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL017582 | 2e-30 | 83.33% | |
| Bombyx | BGIBMGA008476-TA | 3e-07 | 63.16% | |
| Drosophila | CG33557-PA | 1e-15 | 55.71% | |
| EBI UniRef50 | UniRef50_E9HA92 | 6e-17 | 58.67% | Putative uncharacterized protein n=2 Tax=Daphnia pulex RepID=E9HA92_DAPPU |
| NCBI RefSeq | XP_001808472.1 | 1e-15 | 61.54% | PREDICTED: similar to Scleraxis [Tribolium castaneum] |
| NCBI nr blastp | gi|321460294 | 2e-16 | 58.67% | hypothetical protein DAPPUDRAFT_227979 [Daphnia pulex] |
| NCBI nr blastx | gi|321460294 | 3e-15 | 58.67% | hypothetical protein DAPPUDRAFT_227979 [Daphnia pulex] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005634 | 4.3e-12 | nucleus | |
| GO:0006355 | 4.3e-12 | regulation of transcription, DNA-dependent | ||
| KEGG pathway | ||||
| InterPro domain | [2-39] IPR011598 | 4.3e-12 | Helix-loop-helix DNA-binding | |
| [2-35] IPR001092 | 1.7e-09 | Helix-loop-helix DNA-binding domain | ||
| Orthology group | MCL16845 | Patchy | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS207776-TA
ATGGCGTTCAATACTCTCCGACATCTCATACCAACGGAACCAGCAGATCGCAAACTTAGCAAAATAGAGATCCTCAGGCTAGCTGGCAGTTATATCACACACCTCGACAATCAACTGTATACCGGGGATATGGAACAGCCGTGTTTGAAAAAATCCGACACCGTATACAAAACATCTTTGTGTACGTTCTGTTGGTCAACATTAAAAAAGAAGTGA
>DPOGS207776-PA
MAFNTLRHLIPTEPADRKLSKIEILRLAGSYITHLDNQLYTGDMEQPCLKKSDTVYKTSLCTFCWSTLKKK-