| DPOGS207858 | ||
|---|---|---|
| Transcript | DPOGS207858-TA | 618 bp |
| Protein | DPOGS207858-PA | 205 aa |
| Genomic position | DPSCF300042 + 1674292-1676723 | |
| RNAseq coverage | 1104x (Rank: top 11%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL008419 | 2e-92 | 72.65% | |
| Bombyx | BGIBMGA009941-TA | 5e-94 | 76.39% | |
| Drosophila | CG12082-PA | 3e-55 | 50.66% | |
| EBI UniRef50 | UniRef50_A7REZ3 | 5e-61 | 54.42% | Ubiquitin carboxyl-terminal hydrolase (Fragment) n=3 Tax=Nematostella vectensis RepID=A7REZ3_NEMVE |
| NCBI RefSeq | XP_967156.1 | 3e-69 | 59.62% | PREDICTED: similar to ubiquitin carboxyl-terminal hydrolase 5 [Tribolium castaneum] |
| NCBI nr blastp | gi|91078722 | 5e-68 | 59.62% | PREDICTED: similar to ubiquitin carboxyl-terminal hydrolase 5 [Tribolium castaneum] |
| NCBI nr blastx | gi|91078722 | 1e-66 | 59.62% | PREDICTED: similar to ubiquitin carboxyl-terminal hydrolase 5 [Tribolium castaneum] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005515 | 1.8e-12 | protein binding | |
| GO:0006511 | 3.7e-12 | ubiquitin-dependent protein catabolic process | ||
| GO:0004221 | 3.7e-12 | ubiquitin thiolesterase activity | ||
| KEGG pathway | ||||
| InterPro domain | [75-137] IPR009060 | 1.8e-12 | UBA-like | |
| [145-202] IPR001394 | 3.7e-12 | Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 | ||
| [31-67] IPR000449 | 4.4e-11 | Ubiquitin-associated/translation elongation factor EF1B, N-terminal | ||
| [93-130] IPR015940 | 8.3e-11 | Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote | ||
| Orthology group | ||||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS207858-TA
ATGGACCTATCAAGCCTGCGTGGACGCGGTCTGCAGGCCTCTGAATGCCCTCTACCAGACACCTCACCAGAGACCCCCGCCCCTGTCTACAACGAGGAACTGCTGGCTCAACTGTTGGACATGGGATTCCCTATCGAGGCTTGTAAGAAGGCTCTATACTACAGCAACAACTCGGGTATGGAGGCGGCGTCTCACTGGCTCATGGAGCACATGAATGATTGGGACTTCGCCAACAAGTTCGAAGCGCCCGGCGCCAAATCTGATGCAGCAGCGGTGGATGAGGCGAGTTTAGAGCAAGTGACAGGTATGGGCTTCACGAGGACTCAGGCTATCAAAGCTCTCACAGCGACCGACGGTGACGTGGGGCGTGCGCTGGACTGGATCTTCAGCCACGCTGAACAACTCGATGAAGATACTAACCCTGGCTGCAGAGACGGACCGGAGAAATACAAACTCATAGCGTTCATCTCTCACATGGGAACATCAACTATGGTCGGTCACTATGTGTGTCACATACTGCATGAAGGAAGATGGGTCATATTCAATGACAATAAGGTGGCTCTGTCAGAGAACCCCCCAAAGGATCTCGGCTACTTGTACTTATATGAGCGGCTGTGA
>DPOGS207858-PA
MDLSSLRGRGLQASECPLPDTSPETPAPVYNEELLAQLLDMGFPIEACKKALYYSNNSGMEAASHWLMEHMNDWDFANKFEAPGAKSDAAAVDEASLEQVTGMGFTRTQAIKALTATDGDVGRALDWIFSHAEQLDEDTNPGCRDGPEKYKLIAFISHMGTSTMVGHYVCHILHEGRWVIFNDNKVALSENPPKDLGYLYLYERL-