DPOGS207890 | ||
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Transcript | DPOGS207890-TA | 570 bp |
Protein | DPOGS207890-PA | 189 aa |
Genomic position | DPSCF300101 + 230883-231522 | |
RNAseq coverage | 367x (Rank: top 32%) |
Annotation | ||||
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Heliconius | HMEL010241 | 4e-83 | 78.02% |   |
Bombyx | BGIBMGA008477-TA | 9e-75 | 69.27% |   |
Drosophila | mRpL17-PA | 2e-60 | 63.22% |   |
EBI UniRef50 | UniRef50_Q9W0S6 | 3e-58 | 63.22% | IP18235p n=18 Tax=Neoptera RepID=Q9W0S6_DROME |
NCBI RefSeq | XP_321202.3 | 4e-67 | 68.33% | AGAP001865-PA [Anopheles gambiae str. PEST] |
NCBI nr blastp | gi|158301533 | 6e-66 | 68.33% | AGAP001865-PA [Anopheles gambiae str. PEST] |
NCBI nr blastx | gi|158301533 | 6e-65 | 68.33% | AGAP001865-PA [Anopheles gambiae str. PEST] |
Group | ||||
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Gene Ontology | GO:0005840 | 8.7e-77 | ribosome | |
GO:0006412 | 8.7e-77 | translation | ||
GO:0005622 | 8.7e-77 | intracellular | ||
GO:0003735 | 8.7e-77 | structural constituent of ribosome | ||
KEGG pathway | cno:NT01CX_1145 | 2e-08 |   | |
  | K02879 (RP-L17, rplQ) | maps-> | Ribosome | |
InterPro domain | [2-180] IPR000456 | 8.7e-77 | Ribosomal protein L17 | |
Orthology group | MCL12938 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS207890-TA
ATGAATCAAGCTGATATAACGAAACTTGTTTCTAAATTACGAATTAAAGTTCCACCGACACATCGACGCTTAAGAAATCCAGAAGGTCCTGAAGGAAGATTAAATAGGTTGCGAAAAACTGTAACAGGTTTAATTAAATATGAAAGAATCGAATTAAACTATAATAGAGCTGATGAAGCTCGCCAATATGCGGAAAGACTTATATCGGAAGCAATAAGCCATGGAGATTGTCATAAACCCACAATGGAAATAGCCGATTATTGGCTACTTGAAAAGGAACTAGTGCATAAATTGTTTAAAGTTTTAGTGCCTAGATTTGAAAATTCTAGTTCAGCTTTCACCAGAATGTACAAAGCTCCAAAACCAGCATATGGAAGAGTCATAGAAAAGACAATTCTTGAATTGAAAGGAAATCCTTACCCGTCACTAACAACTAGACAACCAAATAATAAATTATTGTTGCAAAATGTCCTGTTAGATGCAGCGAAATATGATTATCGTCAGACAAAGTACGCTGAAATATCGGAAAAAATGTCTACACCAGAAGTATCCAAAAAGCCTGATAGCTAA
>DPOGS207890-PA
MNQADITKLVSKLRIKVPPTHRRLRNPEGPEGRLNRLRKTVTGLIKYERIELNYNRADEARQYAERLISEAISHGDCHKPTMEIADYWLLEKELVHKLFKVLVPRFENSSSAFTRMYKAPKPAYGRVIEKTILELKGNPYPSLTTRQPNNKLLLQNVLLDAAKYDYRQTKYAEISEKMSTPEVSKKPDS-