DPOGS207894 | ||
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Transcript | DPOGS207894-TA | 972 bp |
Protein | DPOGS207894-PA | 323 aa |
Genomic position | DPSCF300101 + 276623-288578 | |
RNAseq coverage | 13x (Rank: top 83%) |
Annotation | ||||
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Heliconius | HMEL010247 | 3e-32 | 82.28% |   |
Bombyx | BGIBMGA008482-TA | 1e-72 | 66.67% |   |
Drosophila | H2.0-PA | 3e-30 | 86.76% |   |
EBI UniRef50 | UniRef50_D2A1C4 | 1e-35 | 43.36% | Putative uncharacterized protein GLEAN_08368 n=1 Tax=Tribolium castaneum RepID=D2A1C4_TRICA |
NCBI RefSeq | XP_001121170.1 | 2e-31 | 66.36% | PREDICTED: similar to H2.0-like homeo box 1 [Apis mellifera] |
NCBI nr blastp | gi|270006199 | 4e-35 | 43.36% | hypothetical protein TcasGA2_TC008368 [Tribolium castaneum] |
NCBI nr blastx | gi|270006199 | 2e-38 | 44.69% | hypothetical protein TcasGA2_TC008368 [Tribolium castaneum] |
Group | ||||
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Gene Ontology | GO:0003677 | 3.7e-23 | DNA binding | |
GO:0006355 | 3.7e-23 | regulation of transcription, DNA-dependent | ||
GO:0043565 | 1.7e-21 | sequence-specific DNA binding | ||
GO:0003700 | 1.7e-21 | sequence-specific DNA binding transcription factor activity | ||
GO:0005515 | 1.7e-20 | protein binding | ||
GO:0005634 | 2e-06 | nucleus | ||
KEGG pathway |   | |||
InterPro domain | [228-294] IPR012287 | 3.7e-23 | Homeodomain-related | |
[233-297] IPR001356 | 1.7e-21 | Homeobox | ||
[209-296] IPR009057 | 1.7e-20 | Homeodomain-like | ||
[264-273] IPR000047 | 2e-06 | Helix-turn-helix motif, lambda-like repressor | ||
[257-268] IPR020479 | 2.8e-06 | Homeobox, eukaryotic | ||
Orthology group | MCL22183 |   | Insect specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS207894-TA
ATGACTTCGGTTAGTGGTGATGTTAACACGTCCAAGTTGAAATTCAGTGTTGATAGTATTCTGGGTAACAATGAGAGTCGTCAGGATGGTTCTGTGTCGGAGGTCAGAGGACAGGAGCCGCCCTGTGCGGGATGTGTCGCTGCACTTTACAGATGCTGTAGAGATGAGCCTCCCCTACTGCAGCTACAATTGCCTTTACCATATGCACATCTGCATCCAGCGTTGAGGCCCACCTCAGGAGGTTTGATGAATTATGGAGTCATGACTTCGGTTAGTGGTGATGTTAACACGTCCAAGTTGAAATTCAGTGTTGATAGTATTCTGGGTAACAATGAGAGTCGTCAGGATGGTTCTGTGTCGGAGGTCAGAGGACAGGAGCCGCCCTGTGCGGGATGTGTCGCTGCACTTTACAGATGCTGTAGAGATGAGCCTCCCCTACTGCAGCTACAATTGCCTTTACCATATGCACATCTGCATCCAGCGTTGAGGCCCACCTCAGATGCTCTACATTTACGTCTATTGAGAGCTTCAGCACAAACATATGTATGGATAAATGCCGACCAAACTCAACTACAGCCAATTGATTACACCTTCTTAGGCTATGAAAGGAAGGATGCTGTCTATCGCTTGCCTCTGCCGACATCGTCTCCAACACAATCATCTGCGCCACGTTGTGACGTTTCGTCGAGCGGTAAAAGAAAACGTTCGTGGTCGCGAGCTGTTTTTAGTAACCTTCAGAGGAAAGGCTTGGAGAGACGGTTTCAAATACAAAAATACATTACCAAGCCTGATAGGAGGCAGCTAGCCGCCACCCTCGGTCTGACTGATGCTCAGGTGAAAGTGTGGTTTCAAAATCGTCGTATGAAATGGCGTCACACGAAAGAAGGTAGAGGGTTGGCGGGAACGAGAGACACAGACACCGCAGTCCATGAAGATAATGAAGATGTCGATGTTGATACACTTAGCGATTAA
>DPOGS207894-PA
MTSVSGDVNTSKLKFSVDSILGNNESRQDGSVSEVRGQEPPCAGCVAALYRCCRDEPPLLQLQLPLPYAHLHPALRPTSGGLMNYGVMTSVSGDVNTSKLKFSVDSILGNNESRQDGSVSEVRGQEPPCAGCVAALYRCCRDEPPLLQLQLPLPYAHLHPALRPTSDALHLRLLRASAQTYVWINADQTQLQPIDYTFLGYERKDAVYRLPLPTSSPTQSSAPRCDVSSSGKRKRSWSRAVFSNLQRKGLERRFQIQKYITKPDRRQLAATLGLTDAQVKVWFQNRRMKWRHTKEGRGLAGTRDTDTAVHEDNEDVDVDTLSD-